RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SLC35D3Q5M8T2 416 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 FAM69BQ5VUD6 431 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 PLBD1Q6P4A8 553 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 NDUFAF7Q7L592 441 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SLCO6A1Q86UG4 719 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ACBD7Q8N6N7 88 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 NANOGP1Q8N7R0 232 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 APCDD1LQ8NCL9 501 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 S100ZQ8WXG8 99 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 LMF1Q96S06 567 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 MMP25Q9NPA2 562 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 MEPEQ9NQ76 525 aaPredicted RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 YARS2Q9Y2Z4 477 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 TMED7Q9Y3B3 224 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 PCDHGA3Q9Y5H0 932 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ARID1BQ8NFD5 2236 aaPredicted RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 BHLHE40O14503 412 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 PTHP01270 115 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 FBXO45P0C2W1 286 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 PTNP21246 168 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 UGT2B10P36537 528 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 APOBEC1P41238 236 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 MLLT10P55197 1068 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 PCOLCEQ15113 449 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 PON3Q15166 354 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SLC35F1Q5T1Q4 408 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 NIPAL3Q6P499 406 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 CROCCP3Q8IVE0 287 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 POMGNT2Q8NAT1 580 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ZSCAN1Q8NBB4 408 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 OR52N1Q8NH53 320 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 THAP3Q8WTV1 239 aaPredicted RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 LIPHQ8WWY8 451 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SPACA9Q96E40 222 aaPredicted RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 IP6K3Q96PC2 410 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 B3GNT4Q9C0J1 378 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ADAM19Q9H013 955 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 PLGRKTQ9HBL7 147 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 HINT3Q9NQE9 182 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 C20orf141Q9NUB4 165 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 MYOTQ9UBF9 498 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 FARSAQ9Y285 508 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 EXOGQ9Y2C4 368 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 GSTK1Q9Y2Q3 226 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 GPR52Q9Y2T5 361 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 CORINQ9Y5Q5 1042 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 IER3IP1Q9Y5U9 82 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 RP1P56715 2156 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 DAPL1A0PJW8 107 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 XKRYO14609 159 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SLC30A4O14863 429 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 OIP5O43482 229 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SUSD5O60279 629 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ATE1O95260 518 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SCG5P05408 212 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 CD14P08571 375 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 CENPAP49450 140 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 RGS6P49758 472 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SSR4P51571 173 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 LSM11P83369 360 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS50-205ENST00000441602 DCTN2Q13561 401 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 IL10RAQ13651 578 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SF3A2Q15428 464 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 CSRP2Q16527 193 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ZNF74Q16587 644 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 COL28A1Q2UY09 1125 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ALG10Q5BKT4 473 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 GPALPP1Q8IXQ4 340 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 TMEM156Q8N614 296 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 DUSP19Q8WTR2 217 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 HGDQ93099 445 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 C8orf44Q96CB5 159 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 DDIT4LQ96D03 193 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 COQ7Q99807 217 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 WDR77Q9BQA1 342 aaPredicted RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 RHNO1Q9BSD3 238 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 OR51V1Q9H2C8 321 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 SIAEQ9HAT2 523 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 MCCC2Q9HCC0 563 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 OSGIN1Q9UJX0 560 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 CAB39Q9Y376 341 aaPredicted RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 SPTBP11277 2137 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 BPTFQ12830 3046 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 A0A087WZY1 265 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 C21orf140B9A014 251 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 NADKO95544 446 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 HPP00738 406 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 TFPIP10646 304 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 ZNF28P17035 718 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 OTX2P32243 289 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 BLVRAP53004 296 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CTXN1P60606 82 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 EFNB1P98172 346 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 PLAURQ03405 335 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 HSF2Q03933 536 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 RUNX1T1Q06455 604 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 SNTA1Q13424 505 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 SSPNQ14714 243 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 FAM69AQ5T7M9 428 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 FAM205BPQ63HN1 556 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms