RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 SLC2A5P22732 501 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 MST1P26927 711 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 TACR3P29371 465 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 GABRA5P31644 462 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 RPL4P36578 427 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 OPRL1P41146 370 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 HTR3AP46098 478 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 POLR2HP52434 150 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 RAB15P59190 212 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 TAS2R43P59537 309 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 ITGADQ13349 1161 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 CRMP1Q14194 572 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 GGTLC2Q14390 218 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 ANGPT1Q15389 498 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 SLC35D3Q5M8T2 416 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 SLC35F1Q5T1Q4 408 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 PAQR6Q6TCH4 344 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 CBLN3Q6UW01 205 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 FAM198BQ6UWH4 519 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 NANOGNBQ7Z5D8 188 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 ACBD7Q8N6N7 88 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 SIRT6Q8N6T7 355 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 FAM98AQ8NCA5 519 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 SLC37A3Q8NCC5 494 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 OR4F15Q8NGB8 312 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 OR51G2Q8NGK0 314 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 OR6Q1Q8NGQ2 317 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 TMEM234Q8WY98 164 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 TTC9Q92623 222 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 MRPL48Q96GC5 212 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 SH3YL1Q96HL8 342 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 ERMAPQ96PL5 475 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 TNFRSF13CQ96RJ3 184 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 SECISBP2Q96T21 854 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 WDR77Q9BQA1 342 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 ARHGAP9Q9BRR9 750 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 CENPOQ9BU64 300 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 NXF2Q9GZY0 626 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 ADAM19Q9H013 955 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 APMAPQ9HDC9 416 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 MMP25Q9NPA2 562 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 EXOSC4Q9NPD3 245 aaKnown RBP12.02□□□□□ -0.49
CPSF4-206ENST00000441580 NANSQ9NR45 359 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 NPFFR2Q9Y5X5 522 aa12.02□□□□□ -0.49
CPSF4-206ENST00000441580 TRAV36DV7A0A075B6V5 113 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 LOC102723996A0A087X1L8 192 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 IGHV3-20A0A0C4DH32 117 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 FAM183AA6NL82 134 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 MCIDASD6RGH6 385 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 J3QRE1 110 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 PRKNO60260 465 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-206ENST00000441580 SLC25A12O75746 678 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 ZFAND5O76080 213 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 APOL3O95236 402 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 NUDT14O95848 222 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 MT-ATP6P00846 226 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 CD63P08962 238 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 CXCR1P25024 350 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 ITPKBP27987 946 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 BMXP51813 675 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 IL10RAQ13651 578 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 KLHL12Q53G59 568 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 EMC4Q5J8M3 183 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 LIPKQ5VXJ0 399 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 TUBA3EQ6PEY2 450 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 ZNF322Q6U7Q0 402 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-206ENST00000441580 SHFQ7M4L6 423 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 GRINAQ7Z429 371 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 MARCH3Q86UD3 253 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 GPALPP1Q8IXQ4 340 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 C10orf53Q8N6V4 93 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 ZNF485Q8NCK3 441 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 RNF138Q8WVD3 245 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 ST8SIA1Q92185 356 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 NACC2Q96BF6 587 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
CPSF4-206ENST00000441580 ASPNQ9BXN1 380 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 NRIP3Q9NQ35 241 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 TRIM36Q9NQ86 728 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 TAS2R10Q9NYW0 307 aa12.01□□□□□ -0.49
CPSF4-206ENST00000441580 COL27A1Q8IZC6 1860 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-206ENST00000441580 ANKUB1A6NFN9 424 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 C12orf71A8MTZ7 269 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 GPX5O75715 221 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 IGHEP01854 428 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 CD14P08571 375 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 ASAH2BP0C7U1 165 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 GALP22466 123 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 UQCRC1P31930 480 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 S100A5P33763 92 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 DOC2BQ14184 412 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 QPRTQ15274 297 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 EXT1Q16394 746 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 ZNF791Q3KP31 576 aaPredicted RBP12□□□□□ -0.49
CPSF4-206ENST00000441580 OR2G6Q5TZ20 316 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 C16orf87Q6PH81 154 aa12□□□□□ -0.49
CPSF4-206ENST00000441580 DBX2Q6ZNG2 339 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms