RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 DNAJA3Q96EY1 480 aa6.98□□□□□ -1.29
HDAC9-214ENST00000441542 MRPL48Q96GC5 212 aaKnown RBP6.98□□□□□ -1.29
HDAC9-214ENST00000441542 PDXPQ96GD0 296 aa6.98□□□□□ -1.29
HDAC9-214ENST00000441542 TMEM169Q96HH4 297 aa6.98□□□□□ -1.29
HDAC9-214ENST00000441542 HRH4Q9H3N8 390 aa6.98□□□□□ -1.29
HDAC9-214ENST00000441542 KCNK15Q9H427 330 aa6.98□□□□□ -1.29
HDAC9-214ENST00000441542 KLHL9Q9P2J3 617 aa6.98□□□□□ -1.29
HDAC9-214ENST00000441542 GNG8Q9UK08 70 aa6.98□□□□□ -1.29
HDAC9-214ENST00000441542 A0A1B0GV90 55 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 A0A1W2PS29 197 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 OR14I1A6ND48 311 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 H3BNC9 293 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CDC42EP2O14613 210 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 LCMT2O60294 686 aaKnown RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 GALR3O60755 368 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 TGM6O95932 706 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 KLK3P07288 261 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ANXA2P07355 339 aaKnown RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SAGP10523 405 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 EPXP11678 715 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 DAOP14920 347 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 EDNRAP25101 427 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 MMP15P51511 669 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 OR2B8PP59922 312 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 FABP9Q0Z7S8 132 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SGCAQ16586 387 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ZNF528Q3MIS6 628 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 OTPQ5XKR4 325 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 B3GNTL1Q67FW5 361 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 IGF2-ASQ6U949 168 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 POGLUT1Q8NBL1 392 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 NAXEQ8NCW5 288 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SMIM4Q8WVI0 70 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SMPDL3AQ92484 453 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ISOC2Q96AB3 205 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SUSD3Q96L08 255 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 VRK1Q99986 396 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 AP5M1Q9H0R1 490 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 PDCD11Q14690 1871 aaKnown RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 A0A1B0GUH1 482 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 A0A1W2PPE3 182 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 TUBAL3A6NHL2 446 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SURF4O15260 269 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 COCHO43405 550 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ATP1B1P05026 303 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CHRM4P08173 479 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SELLP14151 372 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ZNF14P17017 642 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CNR1P21554 472 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 PRPH2P23942 346 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ADH6P28332 368 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 NTSP30990 170 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 TRHRP34981 398 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 POU3F4P49335 361 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CCL14Q16627 93 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SCGB2B2Q4G0G5 96 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 EXOSC6Q5RKV6 272 aaKnown RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 NCMAPQ5T1S8 102 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 STPG1Q5TH74 334 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 FAM109BQ6ICB4 259 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 DCUN1D3Q8IWE4 304 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SLC44A3Q8N4M1 653 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 AMER3Q8N944 861 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ZNF485Q8NCK3 441 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 MORN4Q8NDC4 146 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 OR2AK2Q8NG84 335 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 OR52N1Q8NH53 320 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 NUBPLQ8TB37 319 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 BRIX1Q8TDN6 353 aaKnown RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CASTOR1Q8WTX7 329 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 GLYATL2Q8WU03 294 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 BBS4Q96RK4 519 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 PARP12Q9H0J9 701 aaKnown RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 FN3KQ9H479 309 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 KLHL31Q9H511 634 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ANKRD19PQ9H560 264 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 ZMAT3Q9HA38 289 aaKnown RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 DMRT3Q9NQL9 472 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 NPDC1Q9NQX5 325 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 DZANK1Q9NVP4 752 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 P2RX2Q9UBL9 471 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CLEC4EQ9ULY5 219 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CAMK2AQ9UQM7 478 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 PARP14Q460N5 1801 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 TRIP12Q14669 1992 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SSC5DA1L4H1 1573 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 TRAV27A0A087WT01 109 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 GXYLT2A0PJZ3 443 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 MBLAC1A4D2B0 266 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-214ENST00000441542 VSTM5A8MXK1 200 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 RAD1O60671 282 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SC5DO75845 299 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 GTF2F2P13984 249 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 GATMP50440 423 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 EPHA4P54764 986 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 RAB5BP61020 215 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 PLA2G7Q13093 441 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 SKP2Q13309 424 aa6.97□□□□□ -1.29
HDAC9-214ENST00000441542 CBFBQ13951 182 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms