RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 UBE3DQ7Z6J8 389 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 C9orf40Q8IXQ3 194 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 ZZZ3Q8IYH5 903 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 MIER2Q8N344 545 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 GLB1L3Q8NCI6 653 aaPredicted RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR4M2Q8NGB6 313 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR5M9Q8NGP3 310 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 MAPKAP1Q9BPZ7 522 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NTMT1Q9BV86 223 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 DDX31Q9H8H2 851 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SPAG4Q9NPE6 437 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 AHSPQ9NZD4 102 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NPAP1Q9NZP6 1156 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 ACTR3BQ9P1U1 418 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SPRR3Q9UBC9 169 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 IKZF3Q9UKT9 509 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NUP50Q9UKX7 468 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 LIPGQ9Y5X9 500 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SH3D21A4FU49 640 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TUBAL3A6NHL2 446 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 BBIP1A8MTZ0 92 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FAM25AB3EWG3 89 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FAM25CB3EWG5 89 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FAM25GB3EWG6 89 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 LINC01387J3KSC0 135 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 PIP5K1BO14986 540 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NDUFA2O43678 99 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 ZNF780AO75290 641 aaPredicted RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 ERN1O75460 977 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR4F21O95013 312 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 MT-ND1P03886 318 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TSPAN8P19075 237 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FPR1P21462 350 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FASP25445 335 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 IL12AP29459 219 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 DNASE1L1P49184 302 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 GDI2P50395 445 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SLC37A1P57057 533 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 EBPQ15125 230 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 CTU2Q2VPK5 515 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TBRG1Q3YBR2 411 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 GGTA1PQ4G0N0 100 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FAM219BQ5XKK7 198 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 CLEC6AQ6EIG7 209 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 C8orf82Q6P1X6 216 aaPredicted RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 LIX1LQ8IVB5 337 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR10Z1Q8NGY1 313 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 LHFPL5Q8TAF8 219 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 PROX1Q92786 737 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 RPL3LQ92901 407 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 WNT2BQ93097 391 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 PIGTQ969N2 578 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 MARC2Q969Z3 335 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TMEM80Q96HE8 168 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NSUN5Q96P11 429 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FYTTD1Q96QD9 318 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 ZNF300Q96RE9 604 aaPredicted RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 F2RL3Q96RI0 385 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 ZBTB18Q99592 522 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 UBQLN3Q9H347 655 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TOR3AQ9H497 397 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 DMRT3Q9NQL9 472 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 CRIM1Q9NZV1 1036 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 EGFL7Q9UHF1 273 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 CBLCQ9ULV8 474 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 A0A0G2JMM0 328 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 A0A1W2PPB8 328 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 A0A1W2PRS3 328 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 KIR3DP1A8MWS1 328 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TMEM233B4DJY2 109 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TXNL1O43396 289 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR10H2O60403 315 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NR2F6P10588 404 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 HSD3B1P14060 373 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 GDF1P27539 372 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SERPINB10P48595 397 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 FUT7Q11130 342 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 CSTF3Q12996 717 aaKnown RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SLAMF1Q13291 335 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 CLVS2Q5SYC1 327 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR2A2Q6IF42 318 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 RAB12Q6IQ22 244 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 ZNF793Q6ZN11 406 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 WDR53Q7Z5U6 358 aaPredicted RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NOXA1Q86UR1 476 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NUDT13Q86X67 352 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SHISA5Q8N114 240 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 RPRMLQ8N4K4 120 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 SVOPQ8N4V2 548 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 CDYL2Q8N8U2 506 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 RELL2Q8NC24 303 aaPredicted RBP5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR7G3Q8NG95 312 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 OR4F6Q8NGB9 312 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 LRRC20Q8TCA0 184 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 RIT1Q92963 219 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 C18orf12Q96KH6 178 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 NEDD4LQ96PU5 975 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 TIMP4Q99727 224 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 DOHHQ9BU89 302 aa5.47□□□□□ -1.53
PTPRR-204ENST00000440835 REPIN1Q9BWE0 567 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms