RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 GHRLQ9UBU3 117 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF107Q9UII5 783 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PURGQ9UJV8 347 aaKnown RBP2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 MMP17Q9ULZ9 603 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 PLEKHA6Q9Y2H5 1048 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 CLCA3PQ9Y6N3 262 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ATMQ13315 3056 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 MGAQ8IWI9 3026 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 MED13LQ71F56 2210 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 ADGRG4Q8IZF6 3080 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 NAV1Q8NEY1 1877 aa2.48□□□□□ -2.01
HMGB3P12-201ENST00000438745 NUP205Q92621 2012 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 FOCADQ5VW36 1801 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 THADAQ6YHU6 1953 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 TTC26A0AVF1 554 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 RASGRF2O14827 1237 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 CASKO14936 926 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 PRKAB2O43741 272 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 TYROBPO43914 113 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 UBTFL1P0CB47 393 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 SLC35E2P0CK97 266 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 FUT1P19526 365 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 RPL34P49207 117 aaKnown RBP2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ACADVLP49748 655 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ARHGDIBP52566 201 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 MTTPP55157 894 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 HERVK_113P63132 956 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ERVK-8P63133 956 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 IL9RQ01113 521 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 PAX2Q02962 417 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ILKQ13418 452 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 PDIA5Q14554 519 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 WDR43Q15061 677 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 RAB35Q15286 201 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZIC1Q15915 447 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 MICAQ29983 383 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 KRTAP13-3Q3SY46 172 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 TOR1AIP1Q5JTV8 583 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ATAD3CQ5T2N8 411 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 MARC1Q5VT66 337 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 SLX4IPQ5VYV7 408 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 SLC39A4Q6P5W5 647 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 CCBE1Q6UXH8 406 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 RBM43Q6ZSC3 357 aaKnown RBP2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 METTL13Q8N6R0 699 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ERVK-6Q9BXR3 956 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ACTR8Q9H981 624 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 MARCH5Q9NX47 278 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 DUS2Q9NX74 493 aaKnown RBP2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF490Q9ULM2 529 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 NAALAD2Q9Y3Q0 740 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 RNF115Q9Y4L5 304 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 CABIN1Q9Y6J0 2220 aa2.47□□□□□ -2.01
HMGB3P12-201ENST00000438745 SF3B1O75533 1304 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZNF532Q9HCE3 1301 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 LAMA1P25391 3075 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ATRQ13535 2644 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 NPIPA2E9PIF3 369 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 G3V3Y1 287 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 PDLIM1O00151 329 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 AKR7A3O95154 331 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 KLF8O95600 359 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 SNRPCP09234 159 aaKnown RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ANXA4P09525 319 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 SLC35G4P0C7Q5 338 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 DUX4L4P0CJ87 422 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 RRASP10301 218 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 PAICSP22234 425 aaKnown RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 PTBP1P26599 531 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 PTPN6P29350 595 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 DUSP3P51452 185 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 KRTAP10-8P60410 259 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 FUT7Q11130 342 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZSWIM7Q19AV6 140 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 Q1RN00 199 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 RNF212Q495C1 297 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ACSF3Q4G176 576 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 CCDC92Q53HC0 331 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 EOGTQ5NDL2 527 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 RNLSQ5VYX0 342 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 DMKNQ6E0U4 476 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 BAIAP2L2Q6UXY1 529 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZNF562Q6V9R5 426 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 GPR65Q8IYL9 337 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 EID2Q8N6I1 236 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 MINDY2Q8NBR6 621 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 KLHL30-AS1Q8NEE0 82 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 VN1R17PQ8TDU5 208 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 DQX1Q8TE96 717 aaKnown RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 SELENOMQ8WWX9 145 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ART4Q93070 314 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 C11orf24Q96F05 449 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 PPP1R16AQ96I34 528 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 NMNAT2Q9BZQ4 307 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 RWDD1Q9H446 243 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 KAT8Q9H7Z6 458 aaKnown RBP2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 ASCL3Q9NQ33 180 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 C1orf123Q9NWV4 160 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 MBD2Q9UBB5 411 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 SLC2A6Q9UGQ3 507 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms