RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GARNL3Q5VVW2 1013 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 TCTE3Q8IZS6 198 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 Q8N402 240 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 KLHL36Q8N4N3 616 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 PCNPQ8WW12 178 aaKnown RBP12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 HS6ST2Q96MM7 605 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 COQ7Q99807 217 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 GSTK1Q9Y2Q3 226 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 TMEM184BQ9Y519 407 aaPredicted RBP12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 A0A1B0GTQ1 180 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 CD8B2A6NJW9 211 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 TMEM150CB9EJG8 249 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 TGFBR3LH3BV60 316 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 BHLHE40O14503 412 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 DVL2O14641 736 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 CFIP05156 583 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 CD8BP10966 210 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 SLC2A2P11168 524 aaPredicted RBP12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 TBXA2RP21731 343 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 PAICSP22234 425 aaKnown RBP12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 MAP2K3P46734 347 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 PSG6Q00889 435 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 GRM7Q14831 915 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 HLA-BQ31612 363 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 KANSL1Q7Z3B3 1105 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 CCDC28AQ8IWP9 274 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 OR6C4Q8NGE1 309 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 BRIX1Q8TDN6 353 aaKnown RBP12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 IFT27Q9BW83 186 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 MEPEQ9NQ76 525 aaPredicted RBP12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 STMN3Q9NZ72 180 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 DTX4Q9Y2E6 619 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 C2orf92A0A1B0GVN3 265 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 FITM1A5D6W6 292 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 GNB5O14775 395 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 SEC14L5O43304 696 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 AKAP8O43823 692 aaKnown RBP12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 REM1O75628 298 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 IGHA1P01876 353 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 SLC35E2P0CK97 266 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 MAP3K8P41279 467 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 EMDP50402 254 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 RPS7P62081 194 aaKnown RBP12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 DDI2Q5TDH0 399 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 NIPAL3Q6P499 406 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 CNIH2Q6PI25 160 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 TIGD4Q8IY51 512 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 GDPD1Q8N9F7 314 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 ANGPTL6Q8NI99 470 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 MRPS33Q9Y291 106 aaKnown RBP12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 EXOGQ9Y2C4 368 aaKnown RBP12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 SHISA3A0PJX4 238 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 IGKV1D-16P01601 117 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 MRPL3P09001 348 aaKnown RBP12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 CLUP10909 449 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 TNK1Q13470 666 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 TMEM44Q2T9K0 475 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 LCN1P1Q5VSP4 162 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 VASNQ6EMK4 673 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF322Q6U7Q0 402 aaPredicted RBP12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 BMP8AQ7Z5Y6 402 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 GLRX5Q86SX6 157 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 MARCH9Q86YJ5 346 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 TMEM99Q8N816 258 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 BMPERQ8N8U9 685 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 CYB561A3Q8NBI2 242 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 OR4M2Q8NGB6 313 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 SAP25Q8TEE9 199 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 SMAP2Q8WU79 429 aaPredicted RBP12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 CCDC120Q96HB5 630 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 OR51V1Q9H2C8 321 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 ISYNA1Q9NPH2 558 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 FLRT3Q9NZU0 649 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 MED31Q9Y3C7 131 aa12.76□□□□□ -0.37
PTCHD3-201ENST00000438700 BDP1A6H8Y1 2624 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 GTPBP1O00178 669 aaKnown RBP12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 GABRPO00591 440 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 C1QBP02746 253 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 FAM157BP0CG42 384 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 NOS3P29474 1203 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 AGFG1P52594 562 aaKnown RBP12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 CTBP2P56545 445 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 BTG2P78543 158 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 STX4Q12846 297 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 ZCCHC12Q6PEW1 402 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 CDK20Q8IZL9 346 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 CARFQ8N187 725 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 C19orf18Q8NEA5 215 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 NEIL3Q8TAT5 605 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 RIT1Q92963 219 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 SENP5Q96HI0 755 aaPredicted RBP12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 DUSP23Q9BVJ7 150 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 TMEM27Q9HBJ8 222 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 PRTFDC1Q9NRG1 225 aa12.75□□□□□ -0.37
PTCHD3-201ENST00000438700 CUTCQ9NTM9 273 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms