RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 PRRG3Q9BZD7 231 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 SLIRPQ9GZT3 109 aaKnown RBP19.25■□□□□ 0.67
PTPRF-207ENST00000436724 BOLA2-SMG1P6H3BVE0 249 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 HCN1O60741 890 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 CYC1P08574 325 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 COX6A1P12074 109 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 BMP4P12644 408 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 BCAP31P51572 246 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 E2F1Q01094 437 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 CDCP2Q5VXM1 449 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 OTULINQ96BN8 352 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 SGTBQ96EQ0 304 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 DNAJA3Q96EY1 480 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 TEX12Q9BXU0 123 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 DEFB126Q9BYW3 111 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 HINT3Q9NQE9 182 aaKnown RBP19.25■□□□□ 0.67
PTPRF-207ENST00000436724 CLEC2DQ9UHP7 191 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 B4DXG7 233 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 PRODHO43272 600 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 SLC9A3P48764 834 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 EGR4Q05215 589 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 LNX2Q8N448 690 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 ELP5Q8TE02 316 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 FCGR1BQ92637 280 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 OR5M11Q96RB7 305 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 CDC6Q99741 560 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 CDCA4Q9BXL8 241 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 OSGIN1Q9UJX0 560 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 PADI1Q9ULC6 663 aa19.24■□□□□ 0.67
PTPRF-207ENST00000436724 C9orf172C9J069 976 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 EIF4E2O60573 245 aaKnown RBP19.23■□□□□ 0.67
PTPRF-207ENST00000436724 PPP1R3DO95685 299 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 PNMTP11086 282 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 SLC6A8P48029 635 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 SERPINB10P48595 397 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 SHFQ7M4L6 423 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 SLC46A3Q7Z3Q1 461 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 SNX29P2Q8IUI4 249 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 OR5W2Q8NH69 310 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 HGDQ93099 445 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 TAAR9Q96RI9 348 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 MROQ9BYG7 248 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 MED20Q9H944 212 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 AHCTF1Q8WYP5 2266 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 KDM4EB2RXH2 506 aaPredicted RBP19.23■□□□□ 0.67
PTPRF-207ENST00000436724 MT-CO3P00414 261 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 HMGN1P05114 100 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 TCN2P20062 427 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 FOLR3P41439 243 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 FOXK2Q01167 660 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 EFR3AQ14156 821 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 OXA1LQ15070 435 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 INAQ16352 499 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 AADACL4Q5VUY2 407 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 RPL13AP3Q6NVV1 102 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 PAQR6Q6TCH4 344 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 CPOQ8IVL8 374 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 CYP4Z2PQ8N1L4 340 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 OR52I1Q8NGK6 324 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 LIN37Q96GY3 246 aaPredicted RBP19.23■□□□□ 0.67
PTPRF-207ENST00000436724 TMEM80Q96HE8 168 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 IMMP1LQ96LU5 166 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 ADAM19Q9H013 955 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 FOXJ2Q9P0K8 574 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 SDK2Q58EX2 2172 aa19.23■□□□□ 0.67
PTPRF-207ENST00000436724 PRR33A8MZF0 331 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 PLD2O14939 933 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 P2RX1P51575 399 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 GAS1P54826 345 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 PSPHP78330 225 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 TIGD6Q17RP2 521 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 PLBD1Q6P4A8 553 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 LYPD8Q6UX82 237 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 C6orf15Q6UXA7 325 aaPredicted RBP19.22■□□□□ 0.67
PTPRF-207ENST00000436724 RTL4Q6ZR62 310 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 EGFL6Q8IUX8 553 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 OR11G2Q8NGC1 345 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 RELTQ969Z4 430 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 RNFT2Q96EX2 444 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 MOGAT1Q96PD6 335 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 TAPBPLQ9BX59 468 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 HCAR1Q9BXC0 346 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 ZNF700Q9H0M5 742 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 SOCS6O14544 535 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 CDC40O60508 579 aaKnown RBP eCLIP19.22■□□□□ 0.678e-7■■□□□ 14.2
PTPRF-207ENST00000436724 HSMCR30P0CW71 290 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 CDH11P55287 796 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 MED22Q15528 200 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 COL28A1Q2UY09 1125 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 B3GLCTQ6Y288 498 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 OR10G3Q8NGC4 313 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 NACC2Q96BF6 587 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 ZHX1-C8orf76Q96EF9 292 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 KTI12Q96EK9 354 aaPredicted RBP19.22■□□□□ 0.67
PTPRF-207ENST00000436724 RASL10BQ96S79 203 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 MED17Q9NVC6 651 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 HRH3Q9Y5N1 445 aa19.22■□□□□ 0.67
PTPRF-207ENST00000436724 DLGAP3O95886 979 aa19.21■□□□□ 0.67
PTPRF-207ENST00000436724 PGCP20142 388 aa19.21■□□□□ 0.67
PTPRF-207ENST00000436724 MTNR1AP48039 350 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms