RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MEX3DQ86XN8 651 aaKnown RBP20.81■□□□□ 0.92
CPSF4-204ENST00000436336 SGTBQ96EQ0 304 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ADI1Q9BV57 179 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 GABARAPL3Q9BY60 117 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 OR2B2Q9GZK3 357 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 RAB26Q9ULW5 256 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 LRRC42Q9Y546 428 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 SPIN1Q9Y657 262 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-204ENST00000436336 PTPRQQ9UMZ3 2332 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 IGF2RP11717 2491 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 NPIPB7O75200 414 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 GLSO94925 669 aaPredicted RBP20.8■□□□□ 0.92
CPSF4-204ENST00000436336 OSMP13725 252 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 MAKP20794 623 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 TCEA1P23193 301 aaKnown RBP20.8■□□□□ 0.92
CPSF4-204ENST00000436336 ELK4P28324 431 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 PLGLB1Q02325 96 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 SELENBP1Q13228 472 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 C3orf33Q6P1S2 294 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.8■□□□□ 0.92
CPSF4-204ENST00000436336 DHRSXQ8N5I4 330 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 FAM98AQ8NCA5 519 aaKnown RBP20.8■□□□□ 0.92
CPSF4-204ENST00000436336 EXTL1Q92935 676 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 MBOAT4Q96T53 435 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 PIGQQ9BRB3 760 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 REV1Q9UBZ9 1251 aa20.8■□□□□ 0.92
CPSF4-204ENST00000436336 RPH3AQ9Y2J0 694 aaPredicted RBP20.8■□□□□ 0.92
CPSF4-204ENST00000436336 FKBP2P26885 142 aaKnown RBP20.79■□□□□ 0.92
CPSF4-204ENST00000436336 FOXK1P85037 733 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 RAET1LQ5VY80 246 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 FAM83FQ8NEG4 500 aaPredicted RBP20.79■□□□□ 0.92
CPSF4-204ENST00000436336 OR5M1Q8NGP8 315 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 OR14L1PQ8NHC6 308 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 SLC39A7Q92504 469 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 DDIT4LQ96D03 193 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 RIBC2Q9H4K1 309 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 AP4B1Q9Y6B7 739 aa20.79■□□□□ 0.92
CPSF4-204ENST00000436336 TRAV36DV7A0A075B6V5 113 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 ZC3H12DA2A288 527 aaKnown RBP20.78■□□□□ 0.92
CPSF4-204ENST00000436336 EFCAB9A8MZ26 197 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 CDC42EP2O14613 210 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 EFNA2O43921 213 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 TRAPPC6AO75865 159 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 PDGFAP04085 211 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 HPNP05981 417 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 ESRRGP62508 458 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 NPRL3Q12980 569 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 WLSQ5T9L3 541 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 RASSF6Q6ZTQ3 369 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 SLC25A43Q8WUT9 341 aaPredicted RBP20.78■□□□□ 0.92
CPSF4-204ENST00000436336 TFAP2CQ92754 450 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 KTI12Q96EK9 354 aaPredicted RBP20.78■□□□□ 0.92
CPSF4-204ENST00000436336 FAM118AQ9NWS6 357 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 QPCTLQ9NXS2 382 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 OR2M5A3KFT3 312 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 H0YAE9 185 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 SAGP10523 405 aaPredicted RBP20.78■□□□□ 0.92
CPSF4-204ENST00000436336 IL11P20809 199 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 RFC3P40938 356 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 ADARB1P78563 741 aaKnown RBP20.78■□□□□ 0.92
CPSF4-204ENST00000436336 ZNF169Q14929 603 aaPredicted RBP20.78■□□□□ 0.92
CPSF4-204ENST00000436336 SLC36A3Q495N2 470 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 C6orf52Q5T4I8 152 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 C1orf140Q5VVS0 124 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 YRDCQ86U90 279 aaKnown RBP20.78■□□□□ 0.92
CPSF4-204ENST00000436336 SLC22A16Q86VW1 577 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 TMEM251Q8N6I4 163 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 ZNF555Q8NEP9 628 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 CYGBQ8WWM9 190 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 LIPHQ8WWY8 451 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 ABHD17AQ96GS6 310 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 GRIP2Q9C0E4 1043 aa20.78■□□□□ 0.92
CPSF4-204ENST00000436336 UNC119BA6NIH7 251 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 ACOT7O00154 380 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 OR7A10O76100 309 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 CH25HO95992 272 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 TP53P04637 393 aaPredicted RBP20.77■□□□□ 0.92
CPSF4-204ENST00000436336 POLR2IP36954 125 aaKnown RBP20.77■□□□□ 0.92
CPSF4-204ENST00000436336 CAPGP40121 348 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 RPS5P46782 204 aaKnown RBP20.77■□□□□ 0.92
CPSF4-204ENST00000436336 SLC9A3P48764 834 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 ZNF74Q16587 644 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 TTC23Q5W5X9 447 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 Q6ZS92 163 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 SLC46A3Q7Z3Q1 461 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 CLDN22Q8N7P3 220 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 KDF1Q8NAX2 398 aaPredicted RBP20.77■□□□□ 0.92
CPSF4-204ENST00000436336 TAAR8Q969N4 342 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 UBL7Q96S82 380 aaPredicted RBP20.77■□□□□ 0.92
CPSF4-204ENST00000436336 POTEKPQ9BYX7 375 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 OR11A1Q9GZK7 315 aa20.77■□□□□ 0.92
CPSF4-204ENST00000436336 FAM166BA8MTA8 275 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 SLC16A6O15403 523 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 OR2T1O43869 369 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 AHSA1O95433 338 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 FUT1P19526 365 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 CLK1P49759 484 aaKnown RBP20.76■□□□□ 0.91
CPSF4-204ENST00000436336 CRISP1P54107 249 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 B3GALT5-AS1P59052 145 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 PPIAP62937 165 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms