RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 SLC9A8Q9Y2E8 581 aa13.8□□□□□ -0.2
CALD1-208ENST00000435928 PRSS51A0A1B0GVH4 220 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 CREB1P16220 341 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 NTF4P34130 210 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 HTR3AP46098 478 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 IDH2P48735 452 aaKnown RBP13.79□□□□□ -0.2
CALD1-208ENST00000435928 FOXG1P55316 489 aaPredicted RBP13.79□□□□□ -0.2
CALD1-208ENST00000435928 KCNJ10P78508 379 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 C9orf135Q5VTT2 229 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 ADGRG3Q86Y34 549 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 NUDCD3Q8IVD9 361 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 C17orf78Q8N4C9 275 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 ZNF781Q8N8C0 355 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 OR52E4Q8NGH9 312 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 TMEM158Q8WZ71 300 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 FAM168AQ92567 244 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 DDIT4LQ96D03 193 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 NEURL3Q96EH8 262 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 PKNOX2Q96KN3 472 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 MUS81Q96NY9 551 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 C1QTNF6Q9BXI9 259 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 AKTIPQ9H8T0 292 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 FKRPQ9H9S5 495 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.79□□□□□ -0.2
CALD1-208ENST00000435928 UPB1Q9UBR1 384 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 MARCOQ9UEW3 520 aaPredicted RBP13.79□□□□□ -0.2
CALD1-208ENST00000435928 TRAPPC4Q9Y296 219 aa13.79□□□□□ -0.2
CALD1-208ENST00000435928 TMED7-TICAM2A0A0A6YYA0 188 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ELOA3DA6NLF2 546 aaPredicted RBP13.78□□□□□ -0.2
CALD1-208ENST00000435928 CLDN24A6NM45 220 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ITM2AO43736 263 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 TYROBPO43914 113 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 EIF1BO60739 113 aaKnown RBP13.78□□□□□ -0.2
CALD1-208ENST00000435928 SCN2BO60939 215 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 FAM157CP0CG43 387 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 BMP4P12644 408 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ETV4P43268 484 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 POLR2HP52434 150 aaKnown RBP13.78□□□□□ -0.2
CALD1-208ENST00000435928 SLC35A1P78382 337 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 H3F3AP84243 136 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 VLDLRP98155 873 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 PLAURQ03405 335 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 LOXL1Q08397 574 aaPredicted RBP13.78□□□□□ -0.2
CALD1-208ENST00000435928 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ELOA3BQ3SY89 546 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 AP1ARQ63HQ0 302 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 C1orf162Q8NEQ5 155 aaPredicted RBP13.78□□□□□ -0.2
CALD1-208ENST00000435928 ELOA3Q8NG57 546 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 TESCQ96BS2 214 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ZG16BQ96DA0 208 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 SLC35A5Q9BS91 424 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
CALD1-208ENST00000435928 AMBRA1Q9C0C7 1298 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
CALD1-208ENST00000435928 PARPBPQ9NWS1 579 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 DCTN4Q9UJW0 460 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 AMDHD2Q9Y303 409 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 TMED7Q9Y3B3 224 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 FLVCR1Q9Y5Y0 555 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ATP23Q9Y6H3 246 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 ARFGEF3Q5TH69 2177 aa13.78□□□□□ -0.2
CALD1-208ENST00000435928 PDLIM1O00151 329 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 HMGN4O00479 90 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 AP3D1O14617 1153 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 PHF1O43189 567 aaPredicted RBP13.77□□□□□ -0.21
CALD1-208ENST00000435928 ZNF208O43345 1280 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 CSF3P09919 207 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 MYZAPP0CAP1 466 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 CLNS1AP54105 237 aaKnown RBP13.77□□□□□ -0.21
CALD1-208ENST00000435928 PHC1P78364 1004 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 TGFBR3Q03167 851 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 CHRNB3Q05901 458 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 CASP8Q14790 479 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 CHI3L2Q15782 390 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 SPANXN4Q5MJ08 99 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 CMIPQ8IY22 773 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 WDR31Q8NA23 367 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 CNOT9Q92600 299 aaKnown RBP13.77□□□□□ -0.21
CALD1-208ENST00000435928 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 NAA11Q9BSU3 229 aaPredicted RBP13.77□□□□□ -0.21
CALD1-208ENST00000435928 SLC17A5Q9NRA2 495 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 SLC7A10Q9NS82 523 aa13.77□□□□□ -0.21
CALD1-208ENST00000435928 TMEM72A0PK05 275 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 WDR91A4D1P6 747 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 E9PBE3 544 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 SERPINE1P05121 402 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 UQCRBP14927 111 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 ZNF16P17020 682 aaPredicted RBP13.76□□□□□ -0.21
CALD1-208ENST00000435928 TACR3P29371 465 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
CALD1-208ENST00000435928 EFNA4P52798 201 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 ABCE1P61221 599 aaKnown RBP13.76□□□□□ -0.21
CALD1-208ENST00000435928 SLC25A3Q00325 362 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 FAM174BQ3ZCQ3 159 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 KLHL24Q6TFL4 600 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 RNF130Q86XS8 419 aa13.76□□□□□ -0.21
CALD1-208ENST00000435928 TRIML2Q8N7C3 387 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms