RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 TVP23AA6NH52 213 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 SHOXO15266 292 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 CCL4P13236 92 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 ACTA2P62736 377 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 TRA2BP62995 288 aaKnown RBP11.28□□□□□ -0.6
UBE3B-203ENST00000434735 ACTG2P63267 376 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 ALKBH6Q3KRA9 238 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 TMPRSS12Q86WS5 348 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 LILRA2Q8N149 483 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 TEX26Q8N6G2 289 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 GPBAR1Q8TDU6 330 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 SYT4Q9H2B2 425 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 TAS2R1Q9NYW7 299 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 ACTR3BQ9P1U1 418 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 CTSFQ9UBX1 484 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 RBMX2Q9Y388 322 aaKnown RBP11.28□□□□□ -0.6
UBE3B-203ENST00000434735 TMED7Q9Y3B3 224 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 ST14Q9Y5Y6 855 aa11.28□□□□□ -0.6
UBE3B-203ENST00000434735 LILRB5O75023 590 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 CEACAM5P06731 702 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 NTRK2Q16620 822 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 VASNQ6EMK4 673 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 MEX3DQ86XN8 651 aaKnown RBP11.27□□□□□ -0.6
UBE3B-203ENST00000434735 NAGSQ8N159 534 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 OR56B2PQ8NGI1 322 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 BRIX1Q8TDN6 353 aaKnown RBP11.27□□□□□ -0.6
UBE3B-203ENST00000434735 CT55Q8WUE5 264 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 LOXL4Q96JB6 756 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 ZNF578Q96N58 590 aaPredicted RBP11.27□□□□□ -0.6
UBE3B-203ENST00000434735 POTEKPQ9BYX7 375 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 TARM1B6A8C7 271 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 DLGAP1O14490 977 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 SLC35E2P0CK97 266 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 CHRNB1P11230 501 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.6
UBE3B-203ENST00000434735 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.6
UBE3B-203ENST00000434735 TUBA1BP68363 451 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 TUBA4AP68366 448 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 NKX3-2P78367 333 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 ARL6IP1Q15041 203 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 PLBD1Q6P4A8 553 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 TUBA1AQ71U36 451 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 SLC37A3Q8NCC5 494 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 SDR9C7Q8NEX9 313 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 GLYATL2Q8WU03 294 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 SLCO2A1Q92959 643 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 SYT3Q9BQG1 590 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 UFSP2Q9NUQ7 469 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 TMEM100Q9NV29 134 aa11.27□□□□□ -0.6
UBE3B-203ENST00000434735 MYH6P13533 1939 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 D6RAR5 112 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 SSX5O60225 188 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 SLC19A2O60779 497 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 ALDOBP05062 364 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 HNF1AP20823 631 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CDKN2CP42773 168 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 TGM4P49221 684 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CSNK1G2P78368 415 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 PPA1Q15181 289 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 RAB11BQ15907 218 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CCSMST1Q4G0I0 132 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 VRK2Q86Y07 508 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 ABHD4Q8TB40 342 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CHPT1Q8WUD6 406 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 SAMD8Q96LT4 415 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 SECISBP2Q96T21 854 aaKnown RBP11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CNIH4Q9P003 139 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 TRBV2A0A0J9YWF9 115 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 H7C2Y5 167 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CXCL13O43927 109 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 BIDP55957 195 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 BTG2P78543 158 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 SPATS1Q496A3 300 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 UBE2UQ5VVX9 321 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 PMS2CLQ68D20 193 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 NANOGP8Q6NSW7 305 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 FAM57BQ71RH2 274 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 B3GNT7Q8NFL0 401 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 OR7G1Q8NGA0 311 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 TMEM239Q8WW34 195 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 EXTL1Q92935 676 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 PCDHA9Q9Y5H5 950 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 OR6C70A6NIJ9 312 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 SLC22A31A6NKX4 558 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 GFYI3L273 518 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 PRKNO60260 465 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-203ENST00000434735 GABBR2O75899 941 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 GSTP1P09211 210 aaKnown RBP11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CELP19835 753 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 APOFQ13790 326 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 ZNF773Q6PK81 442 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 TIFABQ6ZNK6 161 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 BAHD1Q8TBE0 780 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-203ENST00000434735 CMAHPQ9Y471 501 aa11.27□□□□□ -0.61
UBE3B-203ENST00000434735 SSC5DA1L4H1 1573 aa11.26□□□□□ -0.61
UBE3B-203ENST00000434735 SPTA1P02549 2419 aa11.26□□□□□ -0.61
UBE3B-203ENST00000434735 A0A096LPE4 126 aa11.26□□□□□ -0.61
UBE3B-203ENST00000434735 A0A1W2PPZ6 126 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms