RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FLVCR1Q9Y5Y0 555 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 NACAE9PAV3 2078 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 IQANK1A0A1B0GTG1 560 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 GOLGA8RI6L899 631 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 FOXE1O00358 373 aaPredicted RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 PDXKO00764 312 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 RAD51BO15315 384 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 NEBLO76041 1014 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MYO1DO94832 1006 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MBD3O95983 291 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SFTPBP07988 381 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 WNT2P09544 360 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 STAG3L2P0CL84 134 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SRMP19623 302 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 NCF2P19878 526 aaPredicted RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 IGFBP5P24593 272 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 NMT1P30419 496 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 DLSTP36957 453 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ACADSBP45954 432 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ATP5IP56385 69 aaPredicted RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 TSPAN5P62079 268 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 HERV-K104P63124 156 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 CD226Q15762 336 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 HNRNPA1L2Q32P51 320 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 TMEM41BQ5BJD5 291 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 THEM4Q5T1C6 240 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 PYHIN1Q6K0P9 492 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 CCDC137Q6PK04 289 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 BLOC1S2Q6QNY1 142 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 TIFABQ6ZNK6 161 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 YRDCQ86U90 279 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 STX12Q86Y82 276 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SELENOHQ8IZQ5 122 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 FNDC5Q8NAU1 212 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 TTLQ8NG68 377 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 OR10T2Q8NGX3 314 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 OR4A16Q8NH70 328 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ANGPTL6Q8NI99 470 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ZNF461Q8TAF7 563 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 CD300LFQ8TDQ1 290 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SCFD1Q8WVM8 642 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 TNFRSF14Q92956 283 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ELSPBP1Q96BH3 223 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ELMO2Q96JJ3 720 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 TESK2Q96S53 571 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 KCNS3Q9BQ31 491 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 PELOQ9BRX2 385 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 NUP58Q9BVL2 599 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SPATA16Q9BXB7 569 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 DDX47Q9H0S4 455 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 TMEM245Q9H330 911 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 FN3KRPQ9HA64 309 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MEAF6Q9HAF1 191 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 RAB18Q9NP72 206 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MYOZ2Q9NPC6 264 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 IL26Q9NPH9 171 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 PAQR5Q9NXK6 330 aaPredicted RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 KLHL28Q9NXS3 571 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 EURLQ9NYK6 297 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 RDH8Q9NYR8 311 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ATXN10Q9UBB4 475 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 STAP1Q9ULZ2 295 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 CA5BQ9Y2D0 317 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 RHBDD3Q9Y3P4 386 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ROCK1Q13464 1354 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 A0A1B0GUA9 196 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 PINLYPA6NC86 204 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 FAM231BA6NCW3 169 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 TRPC5OSA6NMA1 111 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SLC28A1O00337 649 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SLC17A2O00624 439 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SDHDO14521 159 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 GPR171O14626 319 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ABCD4O14678 606 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 EIF3HO15372 352 aaKnown RBP eCLIP2.22□□□□□ -2.05
CLK1-204ENST00000432425 ZNF208O43345 1280 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SSX5O60225 188 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 HSF2BPO75031 334 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 VPS26AO75436 327 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MBP02144 154 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 CAPN1P07384 714 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ALOX5P09917 674 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 H2AFZP0C0S5 128 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 CEBPDP49716 269 aaPredicted RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 RIPPLY3P57055 190 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 YWHAEP62258 255 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 ENPEPQ07075 957 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SIGLEC14Q08ET2 396 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MERTKQ12866 999 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MADCAM1Q13477 382 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ZIC1Q15915 447 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MOGQ16653 247 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 GLYR1Q49A26 553 aaPredicted RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 RABGAP1LQ5R372 815 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SAPCD1Q5SSQ6 148 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 CARD17Q5XLA6 110 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 SLC25A25Q6KCM7 469 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 B3GLCTQ6Y288 498 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 PAQR9Q6ZVX9 377 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 AKAP14Q86UN6 197 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms