RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 HOXD1Q9GZZ0 328 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 FAM107BQ9H098 131 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 RMND5AQ9H871 391 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 A4GALTQ9NPC4 353 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 CHST11Q9NPF2 352 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.88□□□□□ -1.47
SMC6-205ENST00000430591 KLHL28Q9NXS3 571 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 P2RX2Q9UBL9 471 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 PRSS50Q9UI38 385 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 FBXO9Q9UK97 447 aaPredicted RBP5.88□□□□□ -1.47
SMC6-205ENST00000430591 PACSIN3Q9UKS6 424 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 AP4B1Q9Y6B7 739 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 ANKRD17O75179 2603 aaKnown RBP5.88□□□□□ -1.47
SMC6-205ENST00000430591 TEP1Q99973 2627 aaKnown RBP5.88□□□□□ -1.47
SMC6-205ENST00000430591 OTOGQ6ZRI0 2925 aa5.88□□□□□ -1.47
SMC6-205ENST00000430591 PRRC2AP48634 2157 aaKnown RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 CADP27708 2225 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 TMED7-TICAM2A0A0A6YYA0 188 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 CDHR4A6H8M9 788 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 LRRN3E7EW58 273 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 H3BNH8 94 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 M0R3H8 397 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 SYT5O00445 386 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 SHOX2O60902 331 aaPredicted RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 SS18L1O75177 396 aaPredicted RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 THY1P04216 161 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 THBDP07204 575 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 IL7RP16871 459 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 GPX2P18283 190 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 PGCP20142 388 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 CBLP22681 906 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 AGTR1P30556 359 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 DNAJA1P31689 397 aaKnown RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 OPRM1P35372 400 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 GCKP35557 465 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 CPA2P48052 419 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 SUMO3P55854 103 aaPredicted RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 CARD18P57730 90 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 SELENBP1Q13228 472 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 CBFBQ13951 182 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 SCARB2Q14108 478 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 NPTX1Q15818 432 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 FBXL19-AS1Q494R0 122 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 NANOGP8Q6NSW7 305 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 ESPNLQ6ZVH7 1005 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 FCRLAQ7L513 359 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 CHMP1BQ7LBR1 199 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 CADM2Q8N3J6 435 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 OR10A6Q8NH74 314 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 RNF128Q8TEB7 428 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 FAM46AQ96IP4 442 aaKnown RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 MRGPRX4Q96LA9 322 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 ANKRD27Q96NW4 1050 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 WFIKKN1Q96NZ8 548 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 TM9SF2Q99805 663 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 ELAC2Q9BQ52 826 aaKnown RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 PSD2Q9BQI7 771 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 SFXN3Q9BWM7 321 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 PRRG4Q9BZD6 226 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 CCDC134Q9H6E4 229 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 MTHFD2LQ9H903 347 aaPredicted RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 NANOGQ9H9S0 305 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 POLE3Q9NRF9 147 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 ACER3Q9NUN7 267 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 C6orf203Q9P0P8 240 aaPredicted RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 ZNF629Q9UEG4 869 aaPredicted RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 LEF1Q9UJU2 399 aaPredicted RBP5.87□□□□□ -1.47
SMC6-205ENST00000430591 ITGB1BP2Q9UKP3 347 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 LIPT1Q9Y234 373 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 TMED7Q9Y3B3 224 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 ZNF175Q9Y473 711 aa5.87□□□□□ -1.47
SMC6-205ENST00000430591 RAI1Q7Z5J4 1906 aaPredicted RBP5.86□□□□□ -1.47
SMC6-205ENST00000430591 IGKV1D-42A0A075B6H8 117 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 ZNF716A6NP11 495 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 FAM47E-STBD1D6RA91 191 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 MRASO14807 208 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 SYNGR4O95473 234 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 AGR2O95994 175 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 IL18BPO95998 194 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 PLAUP00749 431 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 DBIP07108 87 aaKnown RBP5.86□□□□□ -1.47
SMC6-205ENST00000430591 TROVE2P10155 538 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMC6-205ENST00000430591 CD247P20963 164 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 LOXP28300 417 aaPredicted RBP5.86□□□□□ -1.47
SMC6-205ENST00000430591 ELK4P28324 431 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 KIR2DL3P43628 341 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 DIO1P49895 249 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 CRISP3P54108 245 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 PCBP3P57721 371 aaKnown RBP5.86□□□□□ -1.47
SMC6-205ENST00000430591 OR2B6P58173 313 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 RPS3AP61247 264 aaKnown RBP5.86□□□□□ -1.47
SMC6-205ENST00000430591 CDK6Q00534 326 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 DUSP7Q16829 419 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 LIN52Q52LA3 116 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 SYT14P1Q58G82 188 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 ZNF311Q5JNZ3 666 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 C3orf33Q6P1S2 294 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 STAC2Q6ZMT1 411 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 WDR88Q6ZMY6 472 aa5.86□□□□□ -1.47
SMC6-205ENST00000430591 FAM214BQ7L5A3 538 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms