RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CCKARP32238 428 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 EIF1AXP47813 144 aaKnown RBP15.15■□□□□ 0.02
UBE3D-204ENST00000430071 SUMO3P55854 103 aaPredicted RBP15.15■□□□□ 0.02
UBE3D-204ENST00000430071 FOXF1Q12946 379 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 SGCBQ16585 318 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 INTS11Q5TA45 600 aaKnown RBP15.15■□□□□ 0.02
UBE3D-204ENST00000430071 DHRS4L2Q6PKH6 230 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 PATL1Q86TB9 770 aaKnown RBP15.15■□□□□ 0.02
UBE3D-204ENST00000430071 ARMC8Q8IUR7 673 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 FAM156AQ8NDB6 213 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 GPR119Q8TDV5 335 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 KCTD14Q9BQ13 255 aaPredicted RBP15.15■□□□□ 0.02
UBE3D-204ENST00000430071 EXOSC3Q9NQT5 275 aaKnown RBP15.15■□□□□ 0.02
UBE3D-204ENST00000430071 CD300AQ9UGN4 299 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 ZNF175Q9Y473 711 aa15.15■□□□□ 0.02
UBE3D-204ENST00000430071 AP3D1O14617 1153 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 SERPINB7O75635 380 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 HRGP04196 525 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 PRG2P13727 222 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 ZNF17P17021 662 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 PRKAR1BP31321 381 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 SFTPDP35247 375 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 PEX19P40855 299 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 CCR4P51679 360 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 BNIP1Q12981 228 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 CEACAM7Q14002 265 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 ZNF550Q7Z398 422 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 SMYD1Q8NB12 490 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 TOR1AIP2Q8NFQ8 470 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 GPR32P1Q8NGA4 272 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 SLC7A6OSQ96CW6 309 aaPredicted RBP15.14■□□□□ 0.01
UBE3D-204ENST00000430071 WFIKKN1Q96NZ8 548 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 SPATA5L1Q9BVQ7 753 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 PLEKHF2Q9H8W4 249 aa15.14■□□□□ 0.01
UBE3D-204ENST00000430071 CACYBPQ9HB71 228 aaKnown RBP15.14■□□□□ 0.01
UBE3D-204ENST00000430071 A0A087WZY1 265 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 C7orf72A4D263 438 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 CXCR6O00574 342 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 FRS3O43559 492 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 NUDT14O95848 222 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 CRHP06850 196 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 GKN3PP0CG01 181 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 HSD17B1P14061 328 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 CD247P20963 164 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 KDELR2P33947 212 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 RYKP34925 604 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 MSX2P35548 267 aaPredicted RBP15.13■□□□□ 0.01
UBE3D-204ENST00000430071 ZNF41P51814 821 aaPredicted RBP15.13■□□□□ 0.01
UBE3D-204ENST00000430071 RPS3AP61247 264 aaKnown RBP15.13■□□□□ 0.01
UBE3D-204ENST00000430071 RAC1P63000 192 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 DUSP7Q16829 419 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 SAMD4BQ5PRF9 694 aaKnown RBP15.13■□□□□ 0.01
UBE3D-204ENST00000430071 OR2A2Q6IF42 318 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 ROBO4Q8WZ75 1007 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 ZBTB8AQ96BR9 441 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 SRXN1Q9BYN0 137 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 C1orf21Q9H246 121 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 KLHL28Q9NXS3 571 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 ZFHX3Q15911 3703 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 USF3Q68DE3 2245 aa15.13■□□□□ 0.01
UBE3D-204ENST00000430071 TMEM229AB2RXF0 380 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 ADAMDEC1O15204 470 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 NCK1P16333 377 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 TCN1P20061 433 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-204ENST00000430071 CD79BP40259 229 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 ACAA2P42765 397 aaKnown RBP15.12■□□□□ 0.01
UBE3D-204ENST00000430071 KCNJ5P48544 419 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 CBFBQ13951 182 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 QPRTQ15274 297 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 ZSWIM7Q19AV6 140 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 ANKRD34AQ69YU3 496 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 LILRA2Q8N149 483 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 ATP6V1C2Q8NEY4 427 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 OR2V1Q8NHB1 315 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 DACH2Q96NX9 599 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 WFDC6Q9BQY6 131 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-204ENST00000430071 C6orf203Q9P0P8 240 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-204ENST00000430071 EGFL7Q9UHF1 273 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 TESMINQ9Y4I5 508 aa15.12■□□□□ 0.01
UBE3D-204ENST00000430071 HEATR1Q9H583 2144 aaKnown RBP15.12■□□□□ 0.01
UBE3D-204ENST00000430071 CFAP73A6NFT4 308 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 GSTA4O15217 222 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 NTN1O95631 604 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 PRKCAP17252 672 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 GGT1P19440 569 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 PGCP20142 388 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 KLK2P20151 261 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 HOXC5Q00444 222 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 EPS8Q12929 822 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 FXNQ16595 210 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 EXOC3L2Q2M3D2 409 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 LRRC23Q53EV4 343 aaPredicted RBP15.11■□□□□ 0.01
UBE3D-204ENST00000430071 FBXW10Q5XX13 1052 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 HBMQ6B0K9 141 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 FAM214BQ7L5A3 538 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 ZNF440Q8IYI8 595 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 OSTF1Q92882 214 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 PRRG4Q9BZD6 226 aa15.11■□□□□ 0.01
UBE3D-204ENST00000430071 ARMC7Q9H6L4 198 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms