RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 RNF220Q5VTB9 566 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 PRAMEF8Q5VWM4 474 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 PRAMEF7Q5VXH5 474 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 CLIP4Q8N3C7 705 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 NFKBIDQ8NI38 313 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 S100PBPQ96BU1 408 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF317Q96PQ6 595 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-205ENST00000427897 USB1Q9BQ65 265 aaKnown RBP18.35■□□□□ 0.53
HSPG2-205ENST00000427897 SLAMF8Q9P0V8 285 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 RPS6KB2Q9UBS0 482 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 NDUFAF1Q9Y375 327 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 DEFB108AA8MXU0 73 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 ATE1O95260 518 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 PGM3O95394 542 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 KLK2P20151 261 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 FPR1P21462 350 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 SLC6A2P23975 617 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 IDUAP35475 653 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 NR1H2P55055 460 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 PLAURQ03405 335 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 ITGADQ13349 1161 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 TSC22D1Q15714 1073 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 REEP3Q6NUK4 255 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 Q6ZT83 130 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 MBD6Q96DN6 1003 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 ALPK1Q96QP1 1244 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 TAPBPLQ9BX59 468 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 NSRP1Q9H0G5 558 aaKnown RBP18.34■□□□□ 0.53
HSPG2-205ENST00000427897 BCL2L10Q9HD36 194 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 SLC25A37Q9NYZ2 338 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 VAPAQ9P0L0 249 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 PRSS50Q9UI38 385 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 SLC13A4Q9UKG4 626 aa18.34■□□□□ 0.53
HSPG2-205ENST00000427897 ANKHD1Q8IWZ3 2542 aaKnown RBP18.33■□□□□ 0.53
HSPG2-205ENST00000427897 OTOGQ6ZRI0 2925 aa18.33■□□□□ 0.53
HSPG2-205ENST00000427897 MRPL33O75394 65 aaKnown RBP18.33■□□□□ 0.52
HSPG2-205ENST00000427897 GPIP06744 558 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 BMP2P12643 396 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 LSP1P33241 339 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 GYS2P54840 703 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 GNGT1P63211 74 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 CDK6Q00534 326 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 PDK3Q15120 406 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 STK11Q15831 433 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 BHLHA15Q7RTS1 189 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-205ENST00000427897 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.33■□□□□ 0.52
HSPG2-205ENST00000427897 CCDC103Q8IW40 242 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 GABRG1Q8N1C3 465 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 HSD17B8Q92506 261 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 APH1AQ96BI3 265 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 PLPPR2Q96GM1 343 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 ZNF607Q96SK3 696 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 ADAM19Q9H013 955 aa18.33■□□□□ 0.52
HSPG2-205ENST00000427897 POLQO75417 2590 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-205ENST00000427897 GCM2O75603 506 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-205ENST00000427897 THBDP07204 575 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 ETS2P15036 469 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 ACAA2P42765 397 aaKnown RBP18.32■□□□□ 0.52
HSPG2-205ENST00000427897 CEACAM7Q14002 265 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 ACKR1Q16570 336 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 METTL21CQ5VZV1 264 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 C22orf34Q6ZV56 151 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 SERPINA11Q86U17 422 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 RNF217Q8TC41 542 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 PIGTQ969N2 578 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 MUCL1Q96DR8 90 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 POTEKPQ9BYX7 375 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 PARPBPQ9NWS1 579 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 KLHL14Q9P2G3 628 aa18.32■□□□□ 0.52
HSPG2-205ENST00000427897 CIB4A0PJX0 185 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 CCT8L1PA6NM43 557 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 A8MVM7 634 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 ZNF814B7Z6K7 855 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 SIAH2O43255 324 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 SERPINB7O75635 380 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 LYZL6O75951 148 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 ARAFP10398 606 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 IMPDH2P12268 514 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 PRG2P13727 222 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 ARFIP2P53365 341 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 NCALDP61601 193 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 BNIP2Q12982 314 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 NFYCQ13952 458 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 SCARB2Q14108 478 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 OR7A5Q15622 319 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 OTUD3Q5T2D3 398 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-205ENST00000427897 TMEM225Q6GV28 225 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 ABLIM2Q6H8Q1 611 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 DHDDSQ86SQ9 333 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 MSRB3Q8IXL7 192 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 HS3ST6Q96QI5 342 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 TMEM120AQ9BXJ8 343 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 CXXC4Q9H2H0 198 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 ESRP2Q9H6T0 727 aaKnown RBP18.31■□□□□ 0.52
HSPG2-205ENST00000427897 MRGBPQ9NV56 204 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 BEX4Q9NWD9 120 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-205ENST00000427897 SELENONQ9NZV5 590 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 UPB1Q9UBR1 384 aa18.31■□□□□ 0.52
HSPG2-205ENST00000427897 ING1Q9UK53 422 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms