RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ACSM1Q08AH1 577 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 YIF1BQ5BJH7 314 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 HEPHL1Q6MZM0 1159 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 UCN3Q969E3 161 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 FAM122AQ96E09 287 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 ZMYND19Q96E35 227 aaPredicted RBP13.52□□□□□ -0.24
PTPN13-203ENST00000427191 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.24
PTPN13-203ENST00000427191 CACNA1CQ13936 2221 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 MAGEB4O15481 346 aaPredicted RBP13.52□□□□□ -0.24
PTPN13-203ENST00000427191 FZD7O75084 574 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 TPPPO94811 219 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 PMS2P2O95744 297 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 TIMP2P16035 220 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 SLC11A1P49279 550 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 TP53I3Q53FA7 332 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 OR52W1Q6IF63 320 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 KDM8Q8N371 416 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 CPNE4Q96A23 557 aaPredicted RBP13.52□□□□□ -0.24
PTPN13-203ENST00000427191 SLC6A18Q96N87 628 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 SOX17Q9H6I2 414 aaPredicted RBP13.52□□□□□ -0.24
PTPN13-203ENST00000427191 IMPA2O14732 288 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 CACNG3O60359 315 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF44P15621 663 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 POU3F2P20265 443 aaPredicted RBP13.52□□□□□ -0.24
PTPN13-203ENST00000427191 FBXW12Q6X9E4 464 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 CD163Q86VB7 1156 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 OR2A12Q8NGT7 310 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 FIBINQ8TAL6 211 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 TMEM59Q9BXS4 323 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 UGT2A1Q9Y4X1 527 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 MT-ND4P03905 459 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 NTSR1P30989 418 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 TAF9Q16594 264 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 PGGHGQ32M88 737 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 DMBX1Q8NFW5 382 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 OR52B6Q8NGF0 335 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 THAP3Q8WTV1 239 aaPredicted RBP13.52□□□□□ -0.25
PTPN13-203ENST00000427191 SLC17A9Q9BYT1 436 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 NRIP3Q9NQ35 241 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 C17orf105B2RV13 164 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 SRYQ05066 204 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 ACSS1Q9NUB1 689 aaPredicted RBP13.52□□□□□ -0.25
PTPN13-203ENST00000427191 FTSJ1Q9UET6 329 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 GPR32O75388 356 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 OR2T7P0C7T2 308 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 PSMB1P20618 241 aaKnown RBP13.52□□□□□ -0.25
PTPN13-203ENST00000427191 TAGLN2P37802 199 aaKnown RBP13.52□□□□□ -0.25
PTPN13-203ENST00000427191 TNK1Q13470 666 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 POU4F3Q15319 338 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 RPS27LQ71UM5 84 aaKnown RBP13.52□□□□□ -0.25
PTPN13-203ENST00000427191 OR2T27Q8NH04 317 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 OR4Q3Q8NH05 313 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 PGAP2Q9UHJ9 254 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 RFX2P48378 723 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 SUB1P53999 127 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPN13-203ENST00000427191 MEP1BQ16820 701 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 IL1F10Q8WWZ1 152 aa13.52□□□□□ -0.25
PTPN13-203ENST00000427191 EXOSC3Q9NQT5 275 aaKnown RBP13.52□□□□□ -0.25
PTPN13-203ENST00000427191 A0A1W2PQ09 198 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 HEXAP06865 529 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 TRHRP34981 398 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 RNF144AP50876 292 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 NNATQ16517 81 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 LCN10Q6JVE6 187 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 UBQLN4Q9NRR5 601 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 AJAP1Q9UKB5 411 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 DPP4P27487 766 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 HOXC13P31276 330 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF648Q5T619 568 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 CTU1Q7Z7A3 348 aaKnown RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 OR9Q2Q8NGE9 314 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 RAB3CQ96E17 227 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 C1GALT1Q9NS00 363 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 UFSP2Q9NUQ7 469 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 CNIH4Q9P003 139 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 YTHDF2Q9Y5A9 579 aaKnown RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 PRAMEF27A3QJZ7 478 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 TAAR5O14804 337 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 OTX2P32243 289 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 PRAMEF9Q5VWM5 478 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 NDUFAF7Q7L592 441 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 OR14A16Q8NHC5 309 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 MUCL1Q96DR8 90 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ACAD8Q9UKU7 415 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF443Q9Y2A4 671 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 KLK4Q9Y5K2 254 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 IGLON5A6NGN9 336 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 FOLR1P15328 257 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ISCA2Q86U28 154 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 SLC43A1O75387 559 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 CRHBPP24387 322 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 BTN1A1Q13410 526 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 GLYR1Q49A26 553 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 OSTM1Q86WC4 334 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 NPLOC4Q8TAT6 608 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 CDCA3Q99618 268 aaPredicted RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms