RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 RETREG3Q86VR2 466 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 COMTD1Q86VU5 262 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 S100PBPQ96BU1 408 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 TACO1Q9BSH4 297 aaKnown RBP16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 RAD21L1Q9H4I0 556 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 TMEM181Q9P2C4 612 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 PRDM4Q9UKN5 801 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZNF232Q9UNY5 417 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 IFT52Q9Y366 437 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 TEP1Q99973 2627 aaKnown RBP16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 ARAFP10398 606 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 GPX2P18283 190 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 OR2B6P58173 313 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 HOXC5Q00444 222 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 RUNDC3AQ59EK9 446 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZNF311Q5JNZ3 666 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 NFKBIDQ8NI38 313 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 BBS10Q8TAM1 723 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 CPPED1Q9BRF8 314 aaPredicted RBP16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 HDHD5Q9BXW7 423 aa16.24■□□□□ 0.19
SMARCAL1-205ENST00000425815 PRRC2AP48634 2157 aaKnown RBP16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 FRS3O43559 492 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 DNPH1O43598 174 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 FPR1P21462 350 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 MAP2K6P52564 334 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 SLC16A1P53985 500 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 BNIP2Q12982 314 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 KEAP1Q14145 624 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZSWIM7Q19AV6 140 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 DEFB113Q30KQ7 82 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 GCNT6Q5T4J0 391 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 WBP2NLQ6ICG8 309 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 Q6ZT83 130 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 GALNT5Q7Z7M9 940 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 CADM2Q8N3J6 435 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 DPP10Q8N608 796 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 STEAP2Q8NFT2 490 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 DDIT4LQ96D03 193 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 ALPK1Q96QP1 1244 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 POTEKPQ9BYX7 375 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 RABEP2Q9H5N1 569 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 FANCFQ9NPI8 374 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 EDARQ9UNE0 448 aa16.23■□□□□ 0.19
SMARCAL1-205ENST00000425815 F8P00451 2351 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 A0A0G2JND7 137 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 TMEM247A6NEH6 219 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 TPST1O60507 370 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 PLAUP00749 431 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 ETS2P15036 469 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 PPIBP23284 216 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 CDK6Q00534 326 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 ITGADQ13349 1161 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 SELPLGQ14242 412 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 P2RY6Q15077 328 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 ACKR1Q16570 336 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 CGB2Q6NT52 195 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 SEZ6L2Q6UXD5 910 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 WFDC8Q8IUA0 241 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 C3orf49Q96BT1 292 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 SIKE1Q9BRV8 207 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 TMEM38AQ9H6F2 299 aa16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 LEF1Q9UJU2 399 aaPredicted RBP16.22■□□□□ 0.19
SMARCAL1-205ENST00000425815 LIPT2A6NK58 231 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 NPIPB7O75200 414 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 UQCRBP14927 111 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 IGHV1-2P23083 117 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 CXCR1P25024 350 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 PRKAR1BP31321 381 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 SLC35A1P78382 337 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 CEACAM7Q14002 265 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 SLC17A1Q14916 467 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 TAB1Q15750 504 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 BEX5Q5H9J7 111 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 METTL21CQ5VZV1 264 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 REEP3Q6NUK4 255 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 ATG4DQ86TL0 474 aaPredicted RBP16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 PTOV1Q86YD1 416 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 PIGXQ8TBF5 258 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZHX1-C8orf76Q96EF9 292 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 WFDC6Q9BQY6 131 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 TMEM204Q9BSN7 226 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 TMUB1Q9BVT8 246 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 TRIM33Q9UPN9 1127 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 NDUFAF1Q9Y375 327 aa16.21■□□□□ 0.19
SMARCAL1-205ENST00000425815 MAP1AP78559 2803 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 TMEM229AB2RXF0 380 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 C5orf58C9J3I9 102 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 EIF1BO60739 113 aaKnown RBP16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 LYZL6O75951 148 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 P2RY4P51582 365 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 COPZ1P61923 177 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 SCARB2Q14108 478 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 DHRS4L2Q6PKH6 230 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 PAQR6Q6TCH4 344 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 BHLHA15Q7RTS1 189 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 KRTAP1-3Q8IUG1 177 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 ZNF100Q8IYN0 542 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms