RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CACNA1GO43497 2377 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 TEX13CA0A0J9YWL9 993 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 ACOD1A6NK06 481 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 KLF4O43474 513 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CAPZBP47756 277 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 KCNJ8Q15842 424 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 C3orf38Q5JPI3 329 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 DDI2Q5TDH0 399 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 C19orf48Q6RUI8 117 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 SAMD12Q8N8I0 201 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 RFKQ969G6 155 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 PPP1R14AQ96A00 147 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CTHRC1Q96CG8 243 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 TEX12Q9BXU0 123 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 RNF32Q9H0A6 362 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 HDHD2Q9H0R4 259 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 PDE7BQ9NP56 450 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 PALMDQ9NP74 551 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CCDC59Q9P031 241 aaKnown RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 ZMIZ1Q9ULJ6 1067 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 COPS3Q9UNS2 423 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 OR6C68A6NDL8 312 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 FAM86C2PA6NEL3 165 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 H0YIG0 161 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 APOA1P02647 267 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 SNRPBP14678 240 aaKnown RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 HTR1FP30939 366 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF45Q02386 682 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 ELOCQ15369 112 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 SF3B4Q15427 424 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 EIPR1Q53HC9 387 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 LINC00471Q8N535 108 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 BMPERQ8N8U9 685 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 GHSRQ92847 366 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 KISS1RQ969F8 398 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 C8orf44Q96CB5 159 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 OR11A1Q9GZK7 315 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 TBCCD1Q9NVR7 557 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 MYEF2Q9P2K5 600 aaKnown RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CRNNQ9UBG3 495 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 RASD1Q9Y272 281 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 GSTK1Q9Y2Q3 226 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 ENTPD2Q9Y5L3 495 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 A0A0B4J2E0 115 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 A0A1B0GX12 115 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 SOX1O00570 391 aaPredicted RBP10.93□□□□□ -0.66
PTPRN-204ENST00000423636 ICOSLGO75144 302 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 FBXO45P0C2W1 286 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 CD300LDQ6UXZ3 194 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 LRRC69Q6ZNQ3 347 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 AKAP14Q86UN6 197 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 SDR16C5Q8N3Y7 309 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 Q8N402 240 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 OR1L3Q8NH93 324 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 KTI12Q96EK9 354 aaPredicted RBP10.93□□□□□ -0.66
PTPRN-204ENST00000423636 KCNN2Q9H2S1 579 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 SMOC1Q9H4F8 434 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 TMEM185BQ9H7F4 350 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 PLSCR3Q9NRY6 295 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 PRR32B1ATL7 298 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 MRPS14O60783 128 aaKnown RBP10.93□□□□□ -0.66
PTPRN-204ENST00000423636 SYPP08247 313 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 ELK1P19419 428 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 BLKP51451 505 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 RACK1P63244 317 aaKnown RBP10.93□□□□□ -0.66
PTPRN-204ENST00000423636 PRKCDQ05655 676 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 OR5M1Q8NGP8 315 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 OR14A2Q96R54 314 aa10.93□□□□□ -0.66
PTPRN-204ENST00000423636 TSPAN10Q9H1Z9 355 aaPredicted RBP10.93□□□□□ -0.66
PTPRN-204ENST00000423636 SNTNA6NMZ2 147 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 RNF13O43567 381 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 HCN1O60741 890 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 NKX2-2O95096 273 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF85Q03923 595 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 INPP5JQ15735 1006 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 LEG1Q6P5S2 330 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SLC35F3Q8IY50 421 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 DNAAF1Q8NEP3 725 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 OR5H6Q8NGV6 325 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 PTPMT1Q8WUK0 201 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SNX33Q8WV41 574 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 DACT3Q96B18 629 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF764Q96H86 408 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SRRQ9GZT4 340 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 BRD7Q9NPI1 651 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 CUTCQ9NTM9 273 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 EML5Q05BV3 1969 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ELOA3DA6NLF2 546 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 CTNSO60931 367 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 TIAF1O95411 115 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 GPR3P46089 330 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF181Q2M3W8 571 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ELOA3BQ3SY89 546 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 AGAP7PQ5VUJ5 663 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SLC35D2Q76EJ3 337 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SYT13Q7L8C5 426 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SLC25A45Q8N413 288 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SLC38A9Q8NBW4 561 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ELOA3Q8NG57 546 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 BCL7BQ9BQE9 202 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms