RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 CNOT4O95628 575 aaKnown RBP13.16□□□□□ -0.3
LINC01840-201ENST00000421870 IMPDH2P12268 514 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 PRG2P13727 222 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 CCNA2P20248 432 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
LINC01840-201ENST00000421870 SLC16A1P53985 500 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 CDK6Q00534 326 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 P2RY6Q15077 328 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 POU4F3Q15319 338 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 SFRP5Q5T4F7 317 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 ABLIM2Q6H8Q1 611 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 WBP2NLQ6ICG8 309 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 REEP3Q6NUK4 255 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 PAMR1Q6UXH9 720 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 ZHX1-C8orf76Q96EF9 292 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 ZNF300Q96RE9 604 aaPredicted RBP13.16□□□□□ -0.3
LINC01840-201ENST00000421870 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
LINC01840-201ENST00000421870 PRR14LQ5THK1 2151 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 ZC3H12DA2A288 527 aaKnown RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 C5orf58C9J3I9 102 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 EIF1BO60739 113 aaKnown RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 DNASE1P24855 282 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 PRKAR1BP31321 381 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 NTF4P34130 210 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 ART1P52961 327 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 COPZ1P61923 177 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 SLC35A1P78382 337 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 ITGADQ13349 1161 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 GCNT6Q5T4J0 391 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 Q6ZT83 130 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 SERPINA11Q86U17 422 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 CXorf67Q86X51 503 aaPredicted RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 NFKBIDQ8NI38 313 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 ZC3HAV1LQ96H79 300 aaKnown RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 USB1Q9BQ65 265 aaKnown RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 ACTR6Q9GZN1 396 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 CCDC134Q9H6E4 229 aa13.15□□□□□ -0.3
LINC01840-201ENST00000421870 RAI1Q7Z5J4 1906 aaPredicted RBP13.15□□□□□ -0.3
LINC01840-201ENST00000421870 PRRC2AP48634 2157 aaKnown RBP13.14□□□□□ -0.31
LINC01840-201ENST00000421870 GPR171O14626 319 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 NPIPB7O75200 414 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 ATE1O95260 518 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 ADAP00813 363 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 RAF1P04049 648 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 FPR1P21462 350 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 CXCR1P25024 350 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 EDNRAP25101 427 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 OR2B6P58173 313 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 CGB2Q6NT52 195 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 GALNT5Q7Z7M9 940 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 CCDC103Q8IW40 242 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 PIGXQ8TBF5 258 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 PIK3IP1Q96FE7 263 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 NAA11Q9BSU3 229 aaPredicted RBP13.14□□□□□ -0.31
LINC01840-201ENST00000421870 SPATA5L1Q9BVQ7 753 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 TMEM120AQ9BXJ8 343 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 CACYBPQ9HB71 228 aaKnown RBP13.14□□□□□ -0.31
LINC01840-201ENST00000421870 MRGBPQ9NV56 204 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.14□□□□□ -0.31
LINC01840-201ENST00000421870 PRSS50Q9UI38 385 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 PLEKHA6Q9Y2H5 1048 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 MED13LQ71F56 2210 aa13.14□□□□□ -0.31
LINC01840-201ENST00000421870 A8MVM7 634 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 ANGPT2O15123 496 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 TPST1O60507 370 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 RAMP1O60894 148 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC01840-201ENST00000421870 SLC6A2P23975 617 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 RBBP4Q09028 425 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 BEX5Q5H9J7 111 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 DHRS4L2Q6PKH6 230 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 PAQR6Q6TCH4 344 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 ATG4DQ86TL0 474 aaPredicted RBP13.13□□□□□ -0.31
LINC01840-201ENST00000421870 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 PTOV1Q86YD1 416 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 C3orf49Q96BT1 292 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 ALPK1Q96QP1 1244 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 CGREF1Q99674 301 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 MED4Q9NPJ6 270 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
LINC01840-201ENST00000421870 HIVEP1P15822 2718 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 DSCAMO60469 2012 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 LIPT2A6NK58 231 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 TMEM229AB2RXF0 380 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 FBP2O00757 339 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 MFN2O95140 757 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 GPIP06744 558 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 CD53P19397 219 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 ARFIP2P53365 341 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 PCBP3P57721 371 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms