RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SPG21Q9NZD8 308 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 DHCR7Q9UBM7 475 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 MOKQ9UQ07 419 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 COL4A6Q14031 1691 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 DENND4CQ5VZ89 1909 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 OR14I1A6ND48 311 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 OR2AG2A6NM03 316 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 IFITM5A6NNB3 132 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 TO15178 435 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 COCHO43405 550 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 TBL1XO60907 577 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 OR2F2O95006 317 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 MRPL3P09001 348 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 FBP1P09467 338 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 PTHLHP12272 177 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 TRHRP34981 398 aaPredicted RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 FAUP35544 74 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 SPINT3P49223 89 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 HCCSP53701 268 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 RPS11P62280 158 aaKnown RBP eCLIP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 BEX3Q00994 111 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 SREBF2Q12772 1141 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 OR2F1Q13607 317 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 Q3ZCU0 254 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 DNM1P46Q6ZS02 220 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 MBOAT2Q6ZWT7 520 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 FCRLAQ7L513 359 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF280BQ86YH2 543 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF740Q8NDX6 193 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM159Q96B96 161 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 TM4SF18Q96CE8 201 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 PEX11GQ96HA9 241 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF285Q96NJ3 590 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 TEAD3Q99594 435 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 TRMT61BQ9BVS5 477 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 QRSL1Q9H0R6 528 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 ADGRL4Q9HBW9 690 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 PADI3Q9ULW8 664 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC38A8A6NNN8 435 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 PLPP1O14494 284 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 OGG1O15527 345 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 VNN2O95498 520 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 LATS1O95835 1130 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 ACTL6AO96019 429 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 PRG2P13727 222 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 ABOP16442 354 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 PRKAR1BP31321 381 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 CD52P31358 61 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 CSF2RBP32927 897 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 MISPQ8IVT2 679 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 OR6N1Q8NGY5 312 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 WBP2Q969T9 261 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 EXOSC8Q96B26 276 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 OR14A2Q96R54 314 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 GFI1Q99684 422 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 STARD7Q9NQZ5 370 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 CD84Q9UIB8 345 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 LHX6Q9UPM6 363 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 GPR55Q9Y2T6 319 aaPredicted RBP7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC45A1Q9Y2W3 748 aa7.41□□□□□ -1.22
HMGXB4-202ENST00000418170 PTPRSQ13332 1948 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM189-UBE2V1I3L0A0 370 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 IMPA2O14732 288 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 POP7O75817 140 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 F12P00748 615 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 CD8AP01732 235 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 RAB40ALP0C0E4 278 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 DDX6P26196 483 aaKnown RBP eCLIP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 ADH7P40394 386 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 KHKP50053 298 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 TSTA3Q13630 321 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 PWWP2BQ6NUJ5 590 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 NXPE4Q6UWF7 544 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF813Q6ZN06 617 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 SERINC5Q86VE9 423 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 LILRA3Q8N6C8 439 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 WFDC5Q8TCV5 224 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 C15orf40Q8WUR7 153 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 RAB40AQ8WXH6 277 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 SMPDL3BQ92485 455 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 FAM83CQ9BQN1 747 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 IER2Q9BTL4 223 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 SGPP1Q9BX95 441 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 C1QTNF2Q9BXJ5 285 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 SEC11CQ9BY50 192 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 GPR62Q9BZJ7 368 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 RSPH9Q9H1X1 276 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 AHSPQ9NZD4 102 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 TNFSF18Q9UNG2 199 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 PPIL1Q9Y3C6 166 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 COLCA2A8K830 154 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 ICOSLGO75144 302 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM127O75204 238 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 IRF1P10914 325 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 CBR1P16152 277 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 BTF3P20290 206 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 GRB14Q14449 540 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 SMCO1Q147U7 214 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 CDK5R1Q15078 307 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms