RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ADAMTS17Q8TE56 1095 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 RNF128Q8TEB7 428 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 SETD7Q8WTS6 366 aaKnown RBP2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 APH1BQ8WW43 257 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 NEU4Q8WWR8 484 aaPredicted RBP2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 RORBQ92753 470 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 BORCS5Q969J3 196 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 PTH2Q96A98 100 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 PNPLA2Q96AD5 504 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 EME1Q96AY2 570 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 CREB3L1Q96BA8 519 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 PPWD1Q96BP3 646 aaKnown RBP2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 CXorf40BQ96DE9 158 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 P2RY11Q96G91 374 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 CENPNQ96H22 339 aaPredicted RBP2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 GRAMD2BQ96HH9 432 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 KAZALD1Q96I82 304 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 Q96MT0 163 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 TEPSINQ96N21 525 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 RILPQ96NA2 401 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 NIPSNAP1Q9BPW8 284 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ZSWIM1Q9BR11 485 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 UBXN6Q9BZV1 441 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ZYG11BQ9C0D3 744 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 SEMA6AQ9H2E6 1030 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 EBF3Q9H4W6 596 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 AAMDCQ9H7C9 122 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ZNF665Q9H7R5 613 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ZNF703Q9H7S9 590 aaPredicted RBP2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 NIPAL2Q9H841 368 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 CAB39LQ9H9S4 337 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 GPN2Q9H9Y4 310 aaPredicted RBP2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 RRAGCQ9HB90 399 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 SLC52A3Q9NQ40 469 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 PRSS16Q9NQE7 514 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 GDF3Q9NR23 364 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 CTPS2Q9NRF8 586 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 INTS9Q9NV88 658 aaKnown RBP2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 GID8Q9NWU2 228 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 IL36GQ9NZH8 169 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 MAT2BQ9NZL9 334 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 VAPAQ9P0L0 249 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 TMEM9Q9P0T7 183 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 TINAGQ9UJW2 476 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 OR1A2Q9Y585 309 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 HS3ST3A1Q9Y663 406 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ALG6Q9Y672 507 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 STYXL1Q9Y6J8 313 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ADGRA3Q8IWK6 1321 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ADGRA2Q96PE1 1338 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 PTPRGP23470 1445 aa2.81□□□□□ -1.96
CTDSPL-203ENST00000416688 ERCC6Q03468 1493 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FGD5Q6ZNL6 1462 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 WDR7Q9Y4E6 1490 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 C9orf84Q5VXU9 1444 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TNRQ92752 1358 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 A0A1B0GVI7 797 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 A0A1W2PPV9 198 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SLC5A10A0PJK1 596 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PRSS37A4D1T9 235 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 NKX6-3A6NJ46 265 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SLC22A20A6NK97 555 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZNF729A6NN14 1252 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 NPIPA5E9PKD4 350 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 H0Y980 276 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 hCG_2039718K7EN88 272 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 M0QZ92 97 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 DFFAO00273 331 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 LAD1O00515 517 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 HSPB6O14558 160 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SLC9A3R1O14745 358 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SH2D1BO14796 132 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 INPP4BO15327 924 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FOXN1O15353 648 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MSH4O15457 936 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FADS1O60427 444 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SRPX2O60687 465 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 B3GAT3O94766 335 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 GLSO94925 669 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 VAMP5O95183 116 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 GJB5O95377 273 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 KRT75O95678 551 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ESRRBO95718 433 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 AP2A1O95782 977 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 LATS1O95835 1130 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 EFEMP2O95967 443 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ACTL6AO96019 429 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MT-CO3P00414 261 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SERPINA1P01009 418 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 IGHA1P01876 353 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ORM1P02763 201 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MMP1P03956 469 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 GAPDHP04406 335 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 CALB1P05937 261 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 H1F0P07305 194 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MELTFP08582 738 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZDHHC11BP0C7U3 371 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 CYP2D6P10635 497 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 GATA1P15976 413 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 HIST1H1CP16403 213 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms