RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 AP3D1O14617 1153 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 UBDO15205 165 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 EIF1BO60739 113 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 ANP32DO95626 131 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 LY6G6DO95868 133 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 ZCCHC18P0CG32 403 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 CCNA2P20248 432 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 SLC1A3P43003 542 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 SLC35A1P78382 337 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 EPS8Q12929 822 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 SLC9B1Q4ZJI4 515 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 MRPL2Q5T653 305 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 SEZ6L2Q6UXD5 910 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 DNAJC14Q6Y2X3 702 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 UBE2J2Q8N2K1 259 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 ZNF433Q8N7K0 673 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 NAA11Q9BSU3 229 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 SDR39U1Q9NRG7 319 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 P2RX2Q9UBL9 471 aa15.54■□□□□ 0.08
PDLIM2-208ENST00000416159 TMEM72A0PK05 275 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 TRIM64A6NGJ6 449 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 TRIM64BA6NI03 449 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 KLF11O14901 512 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 SMAD7O15105 426 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 MRPL33O75394 65 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 TACR3P29371 465 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 CRATP43155 626 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 H3F3AP84243 136 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 BSPH1Q075Z2 132 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 ZNF672Q499Z4 452 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 CCDC103Q8IW40 242 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 OR52P1PQ8NH57 321 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 SMAP2Q8WU79 429 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 DNAJA3Q96EY1 480 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 TRMT61AQ96FX7 289 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 ITCHQ96J02 903 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 TPT1P8Q9HAU6 139 aa15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 THUMPD1Q9NXG2 353 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-208ENST00000416159 VPS13CQ709C8 3753 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 A0A1W2PP18 115 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 CIB4A0PJX0 185 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 OR5H1A6NKK0 313 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 OVOL3O00110 214 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 DANCRP0C864 163 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 IMPDH2P12268 514 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 POLR2JP52435 117 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 MVDP53602 400 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 CRISP3P54108 245 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 DSTNP60981 165 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 MAPK11Q15759 364 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 ZSWIM7Q19AV6 140 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 LIN52Q52LA3 116 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 BEND6Q5SZJ8 279 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 NEUROG1Q92886 237 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 ADAM19Q9H013 955 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 SLC6A13Q9NSD5 602 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 PARPBPQ9NWS1 579 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 ASB6Q9NWX5 421 aa15.52■□□□□ 0.08
PDLIM2-208ENST00000416159 DSPPQ9NZW4 1301 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 TMEM247A6NEH6 219 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 CCT8L1PA6NM43 557 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 IGHV3-9P01782 118 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 SOD3P08294 240 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 TFPTP0C1Z6 253 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 ETFAP13804 333 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 CXCR1P25024 350 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 LARS2Q15031 903 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 MAVSQ7Z434 540 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 ATG4DQ86TL0 474 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 VRK2Q86Y07 508 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 MIER2Q8N344 545 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 KBTBD8Q8NFY9 601 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 GTPBP3Q969Y2 492 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 OR52B2Q96RD2 323 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 TRIM2Q9C040 744 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 CACYBPQ9HB71 228 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 TAS2R16Q9NYV7 291 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 CISD1Q9NZ45 108 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 ZNF232Q9UNY5 417 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 SLC9A8Q9Y2E8 581 aa15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 NIPBLQ6KC79 2804 aaeCLIP15.51■□□□□ 0.07
PDLIM2-208ENST00000416159 CSPG4Q6UVK1 2322 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 A0A0G2JPF8 293 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 FAM234BA2RU67 622 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 CDHR4A6H8M9 788 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 HNRNPCL2B2RXH8 293 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 HNRNPCL3B7ZW38 293 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 HNRNPCL1O60812 293 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 RAMP1O60894 148 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 RAD51DO75771 328 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 BCHEP06276 602 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 GKN3PP0CG01 181 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 HNRNPCL4P0DMR1 293 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 NTF4P34130 210 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 COPZ1P61923 177 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 ETFDHQ16134 617 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 C6orf10Q5SRN2 563 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 OR7E24Q6IFN5 339 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 PAQR6Q6TCH4 344 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 ZNF836Q6ZNA1 936 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms