RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CHRNGP07510 517 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 FAM153BP0C7A2 387 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 ZNF23P17027 643 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 RPS26P62854 115 aaKnown RBP13.44□□□□□ -0.26
DDX56-202ENST00000415758 SLC17A1Q14916 467 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 FAM153CQ494X1 144 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 ATP6AP1LQ52LC2 224 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 C6orf136Q5SQH8 315 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 RFLNBQ8N5W9 214 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 KRTCAP2Q8N6L1 136 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 ZNF563Q8TA94 476 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 MIPOL1Q8TD10 442 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 FBXO17Q96EF6 278 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 SAP130Q9H0E3 1048 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 EXOSC3Q9NQT5 275 aaKnown RBP13.44□□□□□ -0.26
DDX56-202ENST00000415758 POLE3Q9NRF9 147 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 EXD2Q9NVH0 621 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 UPB1Q9UBR1 384 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 MOKQ9UQ07 419 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 KIAA0513O60268 411 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 NPHS1O60500 1241 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 BCAS1O75363 584 aaPredicted RBP13.43□□□□□ -0.26
DDX56-202ENST00000415758 AGR2O95994 175 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 WNT11O96014 354 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 KRT4P19013 534 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 PAX7P23759 505 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 MPGP29372 298 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 HTR3AP46098 478 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 MAP2K6P52564 334 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 SNRPD2P62316 118 aaKnown RBP13.43□□□□□ -0.26
DDX56-202ENST00000415758 SLC35A1P78382 337 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 CR1LQ2VPA4 569 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 TSPO2Q5TGU0 170 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 C9orf135Q5VTT2 229 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 IL23RQ5VWK5 629 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 CASP12Q6UXS9 341 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 PMM1Q92871 262 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 TMEM45BQ96B21 275 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 C3orf30Q96M34 536 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 OR11A1Q9GZK7 315 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 PPCSQ9HAB8 311 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 OBP2BQ9NPH6 170 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 PCDHGB4Q9UN71 923 aa13.43□□□□□ -0.26
DDX56-202ENST00000415758 ZNF208O43345 1280 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 PDE5AO76074 875 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 RYKP34925 604 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 SERPINF1P36955 418 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 OR2B6P58173 313 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 PLAURQ03405 335 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 ZSWIM7Q19AV6 140 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 IQCCQ4KMZ1 466 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 TYW3Q6IPR3 259 aaKnown RBP13.42□□□□□ -0.26
DDX56-202ENST00000415758 OLIG3Q7RTU3 272 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 C16orf62Q7Z3J2 963 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 DNAJA3Q96EY1 480 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 C16orf45Q96MC5 204 aaPredicted RBP13.42□□□□□ -0.26
DDX56-202ENST00000415758 NAA11Q9BSU3 229 aaPredicted RBP13.42□□□□□ -0.26
DDX56-202ENST00000415758 SOX7Q9BT81 388 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 C1orf50Q9BV19 199 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 PIF1Q9H611 641 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 WDR45Q9Y484 360 aa13.42□□□□□ -0.26
DDX56-202ENST00000415758 B9A039 149 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 RNASET2O00584 256 aaKnown RBP13.41□□□□□ -0.26
DDX56-202ENST00000415758 TCF21O43680 179 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 SLU7O95391 586 aaKnown RBP13.41□□□□□ -0.26
DDX56-202ENST00000415758 IMPDH2P12268 514 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 GIFP27352 417 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 SOAT1P35610 550 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 CLDN8P56748 225 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 KCNJ10P78508 379 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 EFNB3Q15768 340 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 PAQR6Q6TCH4 344 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 MEX3DQ86XN8 651 aaKnown RBP13.41□□□□□ -0.26
DDX56-202ENST00000415758 ZIC4Q8N9L1 334 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 POMGNT2Q8NAT1 580 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 FNDC5Q8NAU1 212 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 C3orf49Q96BT1 292 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 ZG16BQ96DA0 208 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 SLC35G5Q96KT7 338 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 VRK1Q99986 396 aaPredicted RBP13.41□□□□□ -0.26
DDX56-202ENST00000415758 KATNB1Q9BVA0 655 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 BPESC1Q9GZL8 116 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 OR51I1Q9H343 314 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 CA10Q9NS85 328 aa13.41□□□□□ -0.26
DDX56-202ENST00000415758 FBXO9Q9UK97 447 aaPredicted RBP13.41□□□□□ -0.26
DDX56-202ENST00000415758 TMED7-TICAM2A0A0A6YYA0 188 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 IGHV1-18A0A0C4DH31 117 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 RNF103-CHMP3A0A140T963 221 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 SHBGP04278 402 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 TACSTD2P09758 323 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 G6PDP11413 515 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 ALDH3A1P30838 453 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 IDH2P48735 452 aaKnown RBP13.4□□□□□ -0.26
DDX56-202ENST00000415758 PPOXP50336 477 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 RUNX1T1Q06455 604 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 ADIPOQQ15848 244 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 C3orf36Q3SXR2 165 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 ATAD3BQ5T9A4 648 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms