RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 C3orf38Q5JPI3 329 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 DHRS13Q6UX07 377 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 CXXC5Q7LFL8 322 aaKnown RBP13.38□□□□□ -0.27
RBBP4-204ENST00000414241 TIPARPQ7Z3E1 657 aaKnown RBP13.38□□□□□ -0.27
RBBP4-204ENST00000414241 SLC46A3Q7Z3Q1 461 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 BCDIN3DQ7Z5W3 292 aaKnown RBP13.38□□□□□ -0.27
RBBP4-204ENST00000414241 CACTIN-AS1Q8N1I8 211 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 ARMC10Q8N2F6 343 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 OR52I1Q8NGK6 324 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 OR5M3Q8NGP4 307 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 LGALS12Q96DT0 336 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 RNFT2Q96EX2 444 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 GPX7Q96SL4 187 aaPredicted RBP13.38□□□□□ -0.27
RBBP4-204ENST00000414241 PHOX2BQ99453 314 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 MND1Q9BWT6 205 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 ENKD1Q9H0I2 346 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 WDR70Q9NW82 654 aa13.38□□□□□ -0.27
RBBP4-204ENST00000414241 ARPC3O15145 178 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 SLC25A12O75746 678 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 DKK1O94907 266 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 HIST1H2ABP04908 130 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 ZNF3P17036 446 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 MYL12AP19105 171 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 PAICSP22234 425 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 NOS3P29474 1203 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 GAS1P54826 345 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 RPS4XP62701 263 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 ZNF791Q3KP31 576 aaPredicted RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 HES3Q5TGS1 186 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 TMEM81Q6P7N7 255 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 HIST3H2AQ7L7L0 130 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 P2RY8Q86VZ1 359 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 CPOQ8IVL8 374 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 C10orf53Q8N6V4 93 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 HIST1H2ACQ93077 130 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 FKRPQ9H9S5 495 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 PARD6AQ9NPB6 346 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 NANSQ9NR45 359 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 KLHL21Q9UJP4 597 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 ZNF229Q9UJW7 825 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 HIF3AQ9Y2N7 669 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 SLC6A5Q9Y345 797 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 EXOSC1Q9Y3B2 195 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 ASCC3Q8N3C0 2202 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 TRAV36DV7A0A075B6V5 113 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 A8MVM7 634 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 GABARAPO95166 117 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 HPP00738 406 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 MT-ATP6P00846 226 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 PTHP01270 115 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 APEHP13798 732 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 MLLT10P55197 1068 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 TCF15Q12870 199 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 STPG1Q5TH74 334 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 MEPCEQ7L2J0 689 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 PPP1R32Q7Z5V6 425 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 NANOGP1Q8N7R0 232 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 OR6S1Q8NH40 331 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 STK35Q8TDR2 534 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 NAA50Q9GZZ1 169 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 METTL7AQ9H8H3 244 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 HINT3Q9NQE9 182 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 KLRF1Q9NZS2 232 aa13.37□□□□□ -0.27
RBBP4-204ENST00000414241 EXOGQ9Y2C4 368 aaKnown RBP13.37□□□□□ -0.27
RBBP4-204ENST00000414241 TMED7-TICAM2A0A0A6YYA0 188 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 SLC22A31A6NKX4 558 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 SLC22A1O15245 554 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 AHCYL1O43865 530 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 ITGA10O75578 1167 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 ATE1O95260 518 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 SLC2A10O95528 541 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 PPP1R3DO95685 299 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 CD36P16671 472 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 TGM1P22735 817 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 PAX7P23759 505 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 RPL4P36578 427 aaKnown RBP13.36□□□□□ -0.27
RBBP4-204ENST00000414241 APOBEC1P41238 236 aaKnown RBP13.36□□□□□ -0.27
RBBP4-204ENST00000414241 EGR4Q05215 589 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 SPHARQ15513 63 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 TOMM34Q15785 309 aaPredicted RBP13.36□□□□□ -0.27
RBBP4-204ENST00000414241 ARMCX4Q5H9R4 360 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 SLC35F1Q5T1Q4 408 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 PLBD1Q6P4A8 553 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 LRRC17Q8N6Y2 441 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 AMER2Q8N7J2 671 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 NLGN4YQ8NFZ3 816 aaPredicted RBP13.36□□□□□ -0.27
RBBP4-204ENST00000414241 ERMAPQ96PL5 475 aaPredicted RBP13.36□□□□□ -0.27
RBBP4-204ENST00000414241 MGLLQ99685 303 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 JAM3Q9BX67 310 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 ZNF160Q9HCG1 818 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 NRIP3Q9NQ35 241 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 PPP4R1LQ9P1A2 415 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 CHRNA9Q9UGM1 479 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 TMED7Q9Y3B3 224 aa13.36□□□□□ -0.27
RBBP4-204ENST00000414241 COL27A1Q8IZC6 1860 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms