RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CIDECQ96AQ7 238 aaPredicted RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 ZC3HAV1LQ96H79 300 aaKnown RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF48Q96MX3 618 aaPredicted RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 EPYCQ99645 322 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 MGLLQ99685 303 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 CPPED1Q9BRF8 314 aaPredicted RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 BEX2Q9BXY8 128 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 MAGT1Q9H0U3 335 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 C11orf54Q9H0W9 315 aaPredicted RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 PLK3Q9H4B4 646 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 IKZF5Q9H5V7 419 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 MRPL22Q9NWU5 206 aaKnown RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 PHF11Q9UIL8 331 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 ABCG2Q9UNQ0 655 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 HSPB11Q9Y547 144 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 FAM240BA0A1B0GVZ2 78 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 UBA6A0AVT1 1052 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 TRIM77I1YAP6 450 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SLC28A1O00337 649 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 DHHO43323 396 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SLC22A5O76082 557 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ZFPL1O95159 310 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 KLF8O95600 359 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 PTHP01270 115 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 STSP08842 583 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SLC2A4P14672 509 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CBLP22681 906 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CDKN2CP42773 168 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CNTN1Q12860 1018 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 MADCAM1Q13477 382 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 TSNQ15631 228 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 GLYR1Q49A26 553 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF648Q5T619 568 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 PRAMEF13Q5VWM6 474 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 FAM131AQ6UXB0 335 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 RNF165Q6ZSG1 346 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 Q6ZVL8 140 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 RRM2BQ7LG56 351 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 GDF7Q7Z4P5 450 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 MAFAQ8NHW3 353 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 OR8D1Q8WZ84 308 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ESAMQ96AP7 390 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 COQ8BQ96D53 544 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SNRNP40Q96DI7 357 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 BSCL2Q96G97 398 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CCDC120Q96HB5 630 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 OR52E6Q96RD3 313 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 DCLRE1CQ96SD1 692 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 GAL3ST2Q9H3Q3 398 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 THUMPD1Q9NXG2 353 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ASIC5Q9NY37 505 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 AHSPQ9NZD4 102 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF490Q9ULM2 529 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ITGB1BP1O14713 200 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 HCN1O60741 890 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SCN2BO60939 215 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SEMG1P04279 462 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 IFI30P13284 250 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 DRD2P14416 443 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 EPHA2P29317 976 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 P2RY2P41231 377 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 MC3RP41968 323 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 AGTR2P50052 363 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ERVPABLB-1P60509 514 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 UBE2G2P60604 165 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 RPS15P62841 145 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CSNK1G2P78368 415 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 RELBQ01201 579 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ST3GAL4Q11206 333 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 LAPTM4AQ15012 233 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 TATDN3Q17R31 274 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 OR4F3Q6IEY1 312 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 TSSK4Q6SA08 328 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 PAQR3Q6TCH7 311 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 LIPIQ6XZB0 460 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 TMPRSS9Q7Z410 1059 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 GPSM1Q86YR5 675 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 TRIM48Q8IWZ4 208 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CLDN19Q8N6F1 224 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 C1orf52Q8N6N3 182 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 NUDT11Q96G61 164 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF578Q96N58 590 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 OPALINQ96PE5 141 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CLMPQ9H6B4 373 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SRD5A3Q9H8P0 318 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 BARX1Q9HBU1 254 aaPredicted RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 ZCCHC3Q9NUD5 404 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 CD274Q9NZQ7 290 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 SEC14L4Q9UDX3 406 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 STUB1Q9UNE7 303 aa8.66□□□□□ -1.02
SNHG3-201ENST00000413987 MRPS33Q9Y291 106 aaKnown RBP8.66□□□□□ -1.02
SNHG3-201ENST00000413987 A0A0B4J293 547 aa8.65□□□□□ -1.02
SNHG3-201ENST00000413987 FABP12A6NFH5 140 aa8.65□□□□□ -1.02
SNHG3-201ENST00000413987 FAM90A8PA6NJQ4 464 aa8.65□□□□□ -1.02
SNHG3-201ENST00000413987 K7ESM1 405 aa8.65□□□□□ -1.02
SNHG3-201ENST00000413987 MYL12BO14950 172 aa8.65□□□□□ -1.02
SNHG3-201ENST00000413987 SNAPINO95295 136 aa8.65□□□□□ -1.02
SNHG3-201ENST00000413987 IFNA16P05015 189 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms