RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SLC36A2Q495M3 483 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 C4orf36Q96KX1 117 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 C20orf27Q9GZN8 174 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 H0Y8X5 98 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 YY2O15391 372 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 GABBR2O75899 941 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 HTRA4P83105 476 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 TSC22D1Q15714 1073 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 OR13C2Q8NGS9 318 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 BAHD1Q8TBE0 780 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 A8MVM7 634 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 H0YIG0 161 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 OPN1LWP04000 364 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 IGFBP6P24592 240 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 CCR2P41597 374 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 BMXP51813 675 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 MLLT11Q13015 90 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 LINC00696Q6ZRV3 163 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 LINC00615Q96LM1 132 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 KATNB1Q9BVA0 655 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 PCDHB10Q9UN67 800 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 V9GY05 133 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 SORBS2O94875 1100 aaKnown RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 AKR1D1P51857 326 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 CLDN17P56750 224 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 CARD18P57730 90 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 BEST3Q8N1M1 668 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 LRRC20Q8TCA0 184 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 NPRL2Q8WTW4 380 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 MZB1Q8WU39 189 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 FGF14Q92915 247 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 SNAPC3Q92966 411 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 ELOVL3Q9HB03 270 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 MGAT4CQ9UBM8 478 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 A0A1B0GWA3 101 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 ARSBP15848 533 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 CAPZBP47756 277 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 CYCSP99999 105 aaKnown RBP16.03■□□□□ 0.16
PHRF1-202ENST00000413872 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-202ENST00000413872 STOML3Q8TAV4 291 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 FAM210AQ96ND0 272 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 LHX6Q9UPM6 363 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 AK6Q9Y3D8 172 aaKnown RBP16.03■□□□□ 0.16
PHRF1-202ENST00000413872 MT-ATP6P00846 226 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 F13BP05160 661 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 GLB1P16278 677 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 CD40LGP29965 261 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 SLC6A12P48065 614 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 TBRG1Q3YBR2 411 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 PLCXD3Q63HM9 321 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 LOXHD1Q8IVV2 1947 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 TRBV5-4A0A0C4DH59 114 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 KDM4EB2RXH2 506 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-202ENST00000413872 UBFD1O14562 309 aaKnown RBP16.03■□□□□ 0.16
PHRF1-202ENST00000413872 ERVK-16P61578 105 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 ADARB1P78563 741 aaKnown RBP16.03■□□□□ 0.16
PHRF1-202ENST00000413872 TPRA1Q86W33 373 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 CENPOQ9BU64 300 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 FAM230AA0A1W2PPH8 454 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 OR6C76A6NM76 312 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 SSTR4P31391 388 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 HTR5AP47898 357 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 XKR7Q5GH72 579 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 SH3BGRL2Q9UJC5 107 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 PCDHGA8Q9Y5G5 932 aa16.03■□□□□ 0.16
PHRF1-202ENST00000413872 LINC01565O15544 149 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 MAOAP21397 527 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 PRKACBP22694 351 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 HYAL1Q12794 435 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 NIPAL3Q6P499 406 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 OR5J2Q8NH18 312 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 SGPP1Q9BX95 441 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 APMAPQ9HDC9 416 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM9BQ9NQ34 198 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 SIDT1Q9NXL6 827 aaKnown RBP16.02■□□□□ 0.16
PHRF1-202ENST00000413872 REV1Q9UBZ9 1251 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 EBF1Q9UH73 591 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 C19orf53Q9UNZ5 99 aaPredicted RBP16.02■□□□□ 0.16
PHRF1-202ENST00000413872 RREB1Q92766 1687 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 METTL12A8MUP2 240 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 F5H0A9 414 aaPredicted RBP16.02■□□□□ 0.16
PHRF1-202ENST00000413872 GYPBP06028 91 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 DNASE1P24855 282 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 ZNF91Q05481 1191 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 DPY19L2P2Q6ZN68 376 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 IER2Q9BTL4 223 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 C1QTNF3Q9BXJ4 246 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 MKRN2Q9H000 416 aaKnown RBP16.02■□□□□ 0.16
PHRF1-202ENST00000413872 ARAP2Q8WZ64 1704 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 EVPLQ92817 2033 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 LOC105369274A0A096LPK9 316 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 TRBV4-1A0A0J9YWV2 114 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 OR2T7P0C7T2 308 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 PSMB10P40306 273 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 ZNF81P51508 661 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 LILRA6Q6PI73 481 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 SPARTQ8N0X7 666 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 OR4N4Q8N0Y3 316 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 OR2T27Q8NH04 317 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms