RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 TGIF1Q15583 401 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 TOMM34Q15785 309 aaPredicted RBP10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 SNAPC1Q16533 368 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 ZBED5Q49AG3 693 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 CLEC12AQ5QGZ9 265 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 DCAF10Q5QP82 559 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 ABHD17BQ5VST6 288 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 B3GNTL1Q67FW5 361 aaPredicted RBP10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 OR5M10Q6IEU7 315 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 POMZP3Q6PJE2 187 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 ZNF773Q6PK81 442 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 SMARCD3Q6STE5 483 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 C5orf46Q6UWT4 87 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 TCEANCQ8N8B7 351 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 PAQR8Q8TEZ7 354 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 APH1BQ8WW43 257 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 IPCEF1Q8WWN9 437 aaPredicted RBP10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 UBE2FQ969M7 185 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 SGCZQ96LD1 299 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 IL4I1Q96RQ9 567 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 KLHDC3Q9BQ90 382 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 ANGPTL4Q9BY76 406 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 LHPPQ9H008 270 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 AASSQ9UDR5 926 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 BAIAP2Q9UQB8 552 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 SIGLEC7Q9Y286 467 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 TMED7Q9Y3B3 224 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 ZNF337Q9Y3M9 751 aa10.56□□□□□ -0.72
SNRNP35-202ENST00000412157 IGKV1D-42A0A075B6H8 117 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 TRAV36DV7A0A075B6V5 113 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 TRAV27A0A087WT01 109 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 TRIM64A6NGJ6 449 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 M0R129 80 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 XPNPEP2O43895 674 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 SUSD5O60279 629 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 WBP4O75554 376 aaKnown RBP10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 NDUFB2O95178 105 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 CCL3P10147 92 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 PRKCAP17252 672 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 GABRB1P18505 474 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 FUT1P19526 365 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 RPL5P46777 297 aaKnown RBP10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 ST13P50502 369 aaKnown RBP10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 NR1H2P55055 460 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 OC90Q02509 493 aaPredicted RBP10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 FOXF1Q12946 379 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 TMEM44Q2T9K0 475 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 MEDAGQ5VYS4 303 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 LAIR2Q6ISS4 152 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 ACSM5Q6NUN0 579 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 SLC46A3Q7Z3Q1 461 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 VASH2Q86V25 355 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 PLCZ1Q86YW0 608 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 BEST3Q8N1M1 668 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 ZNF540Q8NDQ6 660 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 OR2M3Q8NG83 312 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 OR4Q3Q8NH05 313 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 OR51A7Q8NH64 312 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 STK35Q8TDR2 534 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 DTNBP1Q96EV8 351 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 IFT27Q9BW83 186 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 CCDC90BQ9GZT6 254 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 SACM1LQ9NTJ5 587 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 PLCXD1Q9NUJ7 323 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 MED17Q9NVC6 651 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 VDAC3Q9Y277 283 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 AKAP13Q12802 2813 aa10.55□□□□□ -0.72
SNRNP35-202ENST00000412157 FASNP49327 2511 aaKnown RBP10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 AHCTF1Q8WYP5 2266 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 TMEM72A0PK05 275 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 ANKRD33BA6NCL7 494 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 SNTNA6NMZ2 147 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 A8MVM7 634 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 PTGES3LE9PB15 166 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 TAF4O00268 1085 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 SNPHO15079 494 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 RGS10O43665 173 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 MRPS14O60783 128 aaKnown RBP10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 SNX4O95219 450 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 AHSA1O95433 338 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 HIST1H2ABP04908 130 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 APOBEC1P41238 236 aaKnown RBP10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 CYB561P49447 251 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 DLX5P56178 289 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 PRPS1P60891 318 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 ZNF74Q16587 644 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 OCLNQ16625 522 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 SMN1Q16637 294 aaKnown RBP10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 ANKDD1AQ495B1 522 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 TMEM201Q5SNT2 666 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 ARHGAP11AQ6P4F7 1023 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 AHSA2Q719I0 299 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 HIST3H2AQ7L7L0 130 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 NANOGNBQ7Z5D8 188 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 CCDC103Q8IW40 242 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 WDFY3Q8IZQ1 3526 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 SVOPQ8N4V2 548 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 FADS6Q8N9I5 356 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 OR1J4Q8NGS1 313 aa10.54□□□□□ -0.72
SNRNP35-202ENST00000412157 TMEM163Q8TC26 289 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms