RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CLEC12BQ2HXU8 276 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 KLHL17Q6TDP4 642 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 TMEM108Q6UXF1 575 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 PEX5LQ8IYB4 626 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 INPP5KQ9BT40 448 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 GRIP2Q9C0E4 1043 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 OR11A1Q9GZK7 315 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 TAS2R16Q9NYV7 291 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 CALML5Q9NZT1 146 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 P2RX2Q9UBL9 471 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 MGAT4BQ9UQ53 548 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 SLC9A8Q9Y2E8 581 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 TMED7Q9Y3B3 224 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 CFAP73A6NFT4 308 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 RAD51DO75771 328 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 IL12AP29459 219 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 CDKN2CP42773 168 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 SLC18A1P54219 525 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 CDH11P55287 796 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 PLAURQ03405 335 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 PDCD4Q53EL6 469 aaKnown RBP13.01□□□□□ -0.33
CBX3-203ENST00000409747 MRPL2Q5T653 305 aaKnown RBP13.01□□□□□ -0.33
CBX3-203ENST00000409747 NXNQ6DKJ4 435 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 OR7E24Q6IFN5 339 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 ATG4DQ86TL0 474 aaPredicted RBP13.01□□□□□ -0.33
CBX3-203ENST00000409747 NEUROG1Q92886 237 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
CBX3-203ENST00000409747 CACYBPQ9HB71 228 aaKnown RBP13.01□□□□□ -0.33
CBX3-203ENST00000409747 BARX1Q9HBU1 254 aaPredicted RBP13.01□□□□□ -0.33
CBX3-203ENST00000409747 PARPBPQ9NWS1 579 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 NKIRAS1Q9NYS0 192 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 CISD1Q9NZ45 108 aaKnown RBP13.01□□□□□ -0.33
CBX3-203ENST00000409747 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 PRR14LQ5THK1 2151 aa13.01□□□□□ -0.33
CBX3-203ENST00000409747 USF3Q68DE3 2245 aa13□□□□□ -0.33
CBX3-203ENST00000409747 AP3D1O14617 1153 aa13□□□□□ -0.33
CBX3-203ENST00000409747 ABCD4O14678 606 aa13□□□□□ -0.33
CBX3-203ENST00000409747 ADAM11O75078 769 aa13□□□□□ -0.33
CBX3-203ENST00000409747 SLC22A3O75751 556 aa13□□□□□ -0.33
CBX3-203ENST00000409747 IGHV3-9P01782 118 aa13□□□□□ -0.33
CBX3-203ENST00000409747 GSNP06396 782 aa13□□□□□ -0.33
CBX3-203ENST00000409747 KITP10721 976 aa13□□□□□ -0.33
CBX3-203ENST00000409747 CCNA2P20248 432 aa13□□□□□ -0.33
CBX3-203ENST00000409747 PCSK6P29122 969 aa13□□□□□ -0.33
CBX3-203ENST00000409747 TACR3P29371 465 aa13□□□□□ -0.33
CBX3-203ENST00000409747 WDR4P57081 412 aaKnown RBP13□□□□□ -0.33
CBX3-203ENST00000409747 H3F3AP84243 136 aa13□□□□□ -0.33
CBX3-203ENST00000409747 EPS8Q12929 822 aa13□□□□□ -0.33
CBX3-203ENST00000409747 TNK1Q13470 666 aa13□□□□□ -0.33
CBX3-203ENST00000409747 GSTA3Q16772 222 aa13□□□□□ -0.33
CBX3-203ENST00000409747 ZSWIM7Q19AV6 140 aa13□□□□□ -0.33
CBX3-203ENST00000409747 PGGHGQ32M88 737 aa13□□□□□ -0.33
CBX3-203ENST00000409747 LIN52Q52LA3 116 aa13□□□□□ -0.33
CBX3-203ENST00000409747 CASP12Q6UXS9 341 aa13□□□□□ -0.33
CBX3-203ENST00000409747 MSANTD1Q6ZTZ1 278 aa13□□□□□ -0.33
CBX3-203ENST00000409747 PNPT1Q8TCS8 783 aaKnown RBP13□□□□□ -0.33
CBX3-203ENST00000409747 MGARPQ8TDB4 240 aa13□□□□□ -0.33
CBX3-203ENST00000409747 HS6ST2Q96MM7 605 aa13□□□□□ -0.33
CBX3-203ENST00000409747 RMND5AQ9H871 391 aa13□□□□□ -0.33
CBX3-203ENST00000409747 THUMPD1Q9NXG2 353 aaKnown RBP13□□□□□ -0.33
CBX3-203ENST00000409747 HIVEP2P31629 2446 aa13□□□□□ -0.33
CBX3-203ENST00000409747 FN1P02751 2386 aaKnown RBP13□□□□□ -0.33
CBX3-203ENST00000409747 TMEM72A0PK05 275 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 TMEM247A6NEH6 219 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 SHISA9B4DS77 424 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 ANP32DO95626 131 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 PTAFRP25105 342 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 CDKN1AP38936 164 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 CRISP3P54108 245 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 FAPQ12884 760 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 NRF1Q16656 503 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 COX20Q5RI15 118 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 C1QTNF12Q5T7M4 302 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 AGAP6Q5VW22 663 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 PAQR6Q6TCH4 344 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 DTX2Q86UW9 622 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 CCDC103Q8IW40 242 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 DNAJA3Q96EY1 480 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 TRAF4Q9BUZ4 470 aaPredicted RBP12.99□□□□□ -0.33
CBX3-203ENST00000409747 NPAP1Q9NZP6 1156 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 ZIM2Q9NZV7 527 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 UPB1Q9UBR1 384 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 DSPPQ9NZW4 1301 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 RAMP1O60894 148 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 C1QCP02747 245 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 GPIP06744 558 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 ZCCHC18P0CG32 403 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 COPZ1P61923 177 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 DEPDC4Q8N2C3 294 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 C1orf162Q8NEQ5 155 aaPredicted RBP12.99□□□□□ -0.33
CBX3-203ENST00000409747 OR52N5Q8NH56 324 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 OR52P1PQ8NH57 321 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 ITCHQ96J02 903 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 MAELQ96JY0 434 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms