RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ZNF717Q9BY31 904 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-205ENST00000409542 MIEF1Q9NQG6 463 aa11.49□□□□□ -0.57
CHRNA1-205ENST00000409542 GALNT8Q9NY28 637 aa11.49□□□□□ -0.57
CHRNA1-205ENST00000409542 ENPP5Q9UJA9 477 aa11.49□□□□□ -0.57
CHRNA1-205ENST00000409542 LYVE1Q9Y5Y7 322 aa11.49□□□□□ -0.57
CHRNA1-205ENST00000409542 COL6A5A8TX70 2615 aa11.49□□□□□ -0.57
CHRNA1-205ENST00000409542 SH3D21A4FU49 640 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ANKRD33BA6NCL7 494 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 TNFRSF11BO00300 401 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 IL18BPO95998 194 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 TMIGD3P0DMS9 266 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 CYP4B1P13584 511 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ANXA8P13928 327 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 AQP1P29972 269 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 FRKP42685 505 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 MAPK12P53778 367 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 GP2P55259 537 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 TGM3Q08188 693 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 SAXO2Q658L1 398 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 OR4C11Q6IEV9 310 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ANGPTL8Q6UXH0 198 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 YRDCQ86U90 279 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 RNF130Q86XS8 419 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ARMC8Q8IUR7 673 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 PM20D2Q8IYS1 436 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 DND1Q8IYX4 353 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 SPPL2AQ8TCT8 520 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ABTB1Q969K4 478 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 TM4SF18Q96CE8 201 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 NTNG2Q96CW9 530 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 NEURL3Q96EH8 262 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 HRASLS5Q96KN8 279 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 DACH2Q96NX9 599 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ZNF300Q96RE9 604 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ANGPTL4Q9BY76 406 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 ROGDIQ9GZN7 287 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 CALHM2Q9HA72 323 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 EXD2Q9NVH0 621 aa11.48□□□□□ -0.57
CHRNA1-205ENST00000409542 MED12LQ86YW9 2145 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 ARRDC5A6NEK1 342 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 PTGES3LE9PB15 166 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 GNB5O14775 395 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 PDPK1O15530 556 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 XPNPEP2O43895 674 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 GOSR1O95249 250 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 BCL10O95999 233 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 SSTR4P31391 388 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 FMO3P31513 532 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 SOAT1P35610 550 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 CASP3P42574 277 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 SSR2P43308 183 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 DSTNP60981 165 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 RPP38P78345 283 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 IL1RL1Q01638 556 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 EMX1Q04741 257 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 HEPACAMQ14CZ8 416 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 TOMM20Q15388 145 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 NPTX1Q15818 432 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 MOGQ16653 247 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 SLC16A12Q6ZSM3 486 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 SLC29A4Q7RTT9 530 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 NUDT13Q86X67 352 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 P3H2Q8IVL5 708 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 PRR22Q8IZ63 422 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 SRFBP1Q8NEF9 429 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 BORCS5Q969J3 196 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 FUNDC2Q9BWH2 189 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 CXorf36Q9H7Y0 433 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 TEX10Q9NXF1 929 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 ETAA1Q9NY74 926 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 ERVK-18Q9QC07 812 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 POFUT2Q9Y2G5 429 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 WIF1Q9Y5W5 379 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 SPACA6W5XKT8 324 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
CHRNA1-205ENST00000409542 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 GLOD5A6NK44 160 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 ARHGEF9O43307 516 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 RGS10O43665 173 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 SMPD2O60906 423 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 FAM20BO75063 409 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 GABARAPO95166 117 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 OPN1SWP03999 348 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 CT62P0C5K7 136 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 KRT20P35900 424 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 GGT2P36268 569 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 ENTPD1P49961 510 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 HMGA2P52926 109 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 SPIBQ01892 262 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 TNFRSF17Q02223 184 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 PIGFQ07326 219 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 MICAQ29983 383 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 SYT6Q5T7P8 510 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 PRSS48Q7RTY5 328 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 LRRC75A-AS1Q8N1F1 130 aa11.46□□□□□ -0.57
CHRNA1-205ENST00000409542 FAM83FQ8NEG4 500 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms