RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 HECTD3Q5T447 861 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 DHRS7BQ6IAN0 325 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 Q6YL49 198 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 QSOX2Q6ZRP7 698 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 BTN2A1Q7KYR7 527 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 FAM122BQ7Z309 247 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 TRMT11Q7Z4G4 463 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 PAQR7Q86WK9 346 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 METTL23Q86XA0 190 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 NANOGP1Q8N7R0 232 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 PNPLA1Q8N8W4 532 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 TEX19Q8NA77 164 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 FAM71CQ8NEG0 241 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 PXT1Q8NFP0 134 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 IPMKQ8NFU5 416 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 COQ8AQ8NI60 647 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 PIH1D2Q8WWB5 315 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 LINC00476Q8WZB0 136 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 GTF3AQ92664 365 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 ELMOD3Q96FG2 381 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 CXorf58Q96LI9 332 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 TMEM68Q96MH6 324 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 OR4K3Q96R72 315 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 OR52E6Q96RD3 313 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 KCNA7Q96RP8 456 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 TSNAXQ99598 290 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 FICDQ9BVA6 458 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 POLR1EQ9GZS1 481 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 RAB6CQ9H0N0 254 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 LMAN2LQ9H0V9 348 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 ALX4Q9H161 411 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 PIGMQ9H3S5 423 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 EVA1AQ9H8M9 152 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 GPN1Q9HCN4 374 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 DUSP22Q9NRW4 184 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 ZFP57Q9NU63 452 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 LIN7CQ9NUP9 197 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 NUDT15Q9NV35 164 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 ZNF624Q9P2J8 865 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 LRIT1Q9P2V4 623 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 COMMD3Q9UBI1 195 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 PCTPQ9UKL6 214 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 UTS2RQ9UKP6 389 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 NEUROG3Q9Y4Z2 214 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 POLR3HQ9Y535 204 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 C2orf16Q68DN1 1984 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 KIF26AQ9ULI4 1882 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 ACACAQ13085 2346 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 LOC105369274A0A096LPK9 316 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 A0A1B0GVC2 190 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FAM74A7A6NL05 159 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SLC38A8A6NNN8 435 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PRRG2O14669 202 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SUV39H1O43463 412 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CHST10O43529 356 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 NARSO43776 548 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 CSO75390 466 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 ATG12O94817 140 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 POP4O95707 220 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 RAB36O95755 333 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SNAI1O95863 264 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 OTCP00480 354 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 IFNA10P01566 189 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 G6PDP11413 515 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PRG2P13727 222 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CPN1P15169 458 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ENGP17813 658 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ERCC2P18074 760 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PTAFRP25105 342 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 S100A3P33764 101 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 KDELR2P33947 212 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 THBS4P35443 961 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SOX3P41225 446 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 GZMMP51124 257 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 VSX2P58304 361 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 CD81P60033 236 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SPCS3P61009 180 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 MXD1Q05195 221 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 OLIG2Q13516 323 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CDH18Q13634 790 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SMCO1Q147U7 214 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PON3Q15166 354 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 GSG1Q2KHT4 349 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FAM174BQ3ZCQ3 159 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FAM74A3Q4VXF1 159 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FAM69AQ5T7M9 428 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 DGAT2L7PQ6IED9 249 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 RPL13AP3Q6NVV1 102 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FAM180BQ6P0A1 224 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ANKRD16Q6P6B7 361 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SSX9Q7RTT3 188 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PEG10Q86TG7 708 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 UNC93AQ86WB7 457 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FAM131BQ86XD5 332 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 OR4N4Q8N0Y3 316 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 RYBPQ8N488 228 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 GPR26Q8NDV2 337 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 OR52K2Q8NGK3 314 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 OR5M9Q8NGP3 310 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 WDR20Q8TBZ3 569 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms