RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	SIDT1	Q9NXL6	827 aa	Known RBP	12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	FAM230A	A0A1W2PPH8	454 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	HTR2B	P41595	481 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	GPR19	Q15760	415 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	TMEM201	Q5SNT2	666 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	UBE2U	Q5VVX9	321 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	METRNL	Q641Q3	311 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	PARM1	Q6UWI2	310 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MMP21	Q8N119	569 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454		H7C2Y5	167 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	TF	P02787	698 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	EPHA4	P54764	986 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	FXYD4	P59646	89 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ENTHD1	Q8IYW4	607 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ZNF582	Q96NG8	517 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ST6GALNAC5	Q9BVH7	336 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	FGF22	Q9HCT0	170 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	PPT2	Q9UMR5	302 aa		12.37	□□□□□ -0.43
CACNA1C-222	ENST00000406454	LOC105369274	A0A096LPK9	316 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	SUSD5	O60279	629 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	PAH	P00439	452 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	C5orf46	Q6UWT4	87 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	OR4N4	Q8N0Y3	316 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	AMBRA1	Q9C0C7	1298 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MED20	Q9H944	212 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ZNF281	Q9Y2X9	895 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	LOC102725191	A0A1B0GVB3	256 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454		A6NIN4	97 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	FAM155A	B1AL88	458 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	GFY	I3L273	518 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454		K7ESM1	405 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	PLPP1	O14494	284 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ACPP	P15309	386 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	CYCS	P99999	105 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	SMAD2	Q15796	467 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	LINC01599	Q8WXQ3	324 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ZNF578	Q96N58	590 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ZDHHC5	Q9C0B5	715 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	OR51J1	Q9H342	316 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MOK	Q9UQ07	419 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	BTAF1	O14981	1849 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454		A0A1B0GWA3	101 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	PTH	P01270	115 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	BMP1	P13497	986 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	RAC2	P15153	192 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	COL16A1	Q07092	1604 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	CPT1C	Q8TCG5	803 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ELP4	Q96EB1	424 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	NIPSNAP1	Q9BPW8	284 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ULBP2	Q9BZM5	246 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	DIMT1	Q9UNQ2	313 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ANKRD30BL	A7E2S9	258 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	TNFRSF10C	O14798	259 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	SLC16A6	O15403	523 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	POLR2H	P52434	150 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	RELA	Q04206	551 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	SPOCK1	Q08629	439 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	NXNL2	Q5VZ03	156 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MTFR2	Q6P444	385 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	DLEU7	Q6UYE1	221 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	LCOR	Q96JN0	433 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	CCNL2	Q96S94	520 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	NUDT22	Q9BRQ3	303 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MCOLN1	Q9GZU1	580 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	EIF5A2	Q9GZV4	153 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	DHCR7	Q9UBM7	475 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	PISD	Q9UG56	409 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	LOC102723532	A0A0G2JNH3	316 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MEIS3P1	A6NDR6	274 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	CTNS	O60931	367 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	OR8G3P	P0DMU2	310 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ADARB1	P78563	741 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ZNF616	Q08AN1	781 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	OR13F1	Q8NGS4	319 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	DUSP19	Q8WTR2	217 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	OR1E3	Q8WZA6	343 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ELSPBP1	Q96BH3	223 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MMACHC	Q9Y4U1	282 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	IFNA1	P01562	189 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	DCN	P07585	359 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	GABRA5	P31644	462 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	AQP2	P41181	271 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ZNF767P	Q75MW2	155 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	MISP	Q8IVT2	679 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	FAM160A2	Q8N612	972 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ANKRD19P	Q9H560	264 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	FGF21	Q9NSA1	209 aa		12.36	□□□□□ -0.43
CACNA1C-222	ENST00000406454	RPS25	P62851	125 aa	Known RBP	12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	TMEM240	Q5SV17	173 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	GDF7	Q7Z4P5	450 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	ELMOD3	Q96FG2	381 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	RGCC	Q9H4X1	137 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	KLHL13	Q9P2N7	655 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	B3GALT1	Q9Y5Z6	326 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	SIGLEC6	O43699	453 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	SGPP2	Q8IWX5	399 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	NDUFAF4	Q9P032	175 aa		12.35	□□□□□ -0.43
CACNA1C-222	ENST00000406454	TLCD2	A6NGC4	264 aa		12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms