RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FAM240BA0A1B0GVZ2 78 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 CTAGE15A4D2H0 777 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 OR6C65A6NJZ3 312 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 H7C423 109 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 BTN3A3O00478 584 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 ARPC3O15145 178 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF208O43345 1280 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 CALUO43852 315 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 TSC22D2O75157 780 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 SNNO75324 88 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 NEBLO76041 1014 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 IGHV3-9P01782 118 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 WNT2P09544 360 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 PNMA6AP0CW24 399 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 TPSB2P20231 275 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 HNF1AP20823 631 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 UQCRC2P22695 453 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 RPL4P36578 427 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 PRELPP51888 382 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 AIF1P55008 147 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 ATP5IP56385 69 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 RND3P61587 244 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 OTUD4Q01804 1114 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF33BQ06732 778 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 FGL1Q08830 312 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 DDX39BQ13838 428 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 TPSAB1Q15661 275 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 CYP51A1Q16850 503 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 BOLA3Q53S33 107 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 NIPA1Q7RTP0 329 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 NLRP9Q7RTR0 991 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 EFL1Q7Z2Z2 1120 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 MOB3BQ86TA1 216 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF329Q86UD4 541 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 CTAGE6Q86UF2 777 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 UBQLNLQ8IYU4 475 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 BPIFB2Q8N4F0 458 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 DHRSXQ8N5I4 330 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 C15orf54Q8N8G6 183 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 AENQ8WTP8 325 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 TFB1MQ8WVM0 346 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 FAM3CQ92520 227 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 TUBGCP3Q96CW5 907 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 NTNG2Q96CW9 530 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 SECISBP2Q96T21 854 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 GCOM2Q9BZD3 368 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 MEAF6Q9HAF1 191 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 MYOZ2Q9NPC6 264 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 TIGARQ9NQ88 270 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 UTP6Q9NYH9 597 aaKnown RBP3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 TFR2Q9UP52 801 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 ASB3Q9Y575 518 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 SAR1BQ9Y6B6 198 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 QSER1Q2KHR3 1735 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 MYH2Q9UKX2 1941 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 MYH13Q9UKX3 1938 aa3.83□□□□□ -1.8
HMGB3P18-201ENST00000406327 CHD4Q14839 1912 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 CCDC88AQ3V6T2 1871 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 ANKRD31Q8N7Z5 1873 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 NAV1Q8NEY1 1877 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 CASZ1Q86V15 1759 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 A0A087WYN8 130 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF487B1APH4 448 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 RSPH10B2B2RC85 870 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 GPRIN2O60269 458 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 LRATO95237 230 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 IGF1P05019 195 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 RSPH10BP0C881 870 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 RPS12P25398 132 aaKnown RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 MT3P25713 68 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 MAGEA1P43355 309 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 GSK3BP49841 420 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 NOVA1P51513 510 aaKnown RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 MS4A2Q01362 244 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 MAP2K1Q02750 393 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 C17orf58Q2M2W7 97 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 TMEM44Q2T9K0 475 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 TEX44Q53QW1 395 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 OTUD3Q5T2D3 398 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 ACSM5Q6NUN0 579 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 FAM71F2Q6NXP2 309 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 FAHD2BQ6P2I3 314 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 RFWD3Q6PCD5 774 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 DOK6Q6PKX4 331 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 STAC2Q6ZMT1 411 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF720Q7Z2F6 126 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 DEFB132Q7Z7B7 95 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 CCDC50Q8IVM0 306 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 LRRC43Q8N309 656 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 RNF10Q8N5U6 811 aaKnown RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 Q8N9G6 341 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 CSNK1G2-AS1Q8NCQ2 148 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 C18orf25Q96B23 403 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 RAB3CQ96E17 227 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 FAHD2AQ96GK7 314 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 COQ2Q96H96 371 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 TPD52L3Q96J77 140 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 TGM7Q96PF1 710 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 TEKT3Q9BXF9 490 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 UBXN6Q9BZV1 441 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms