RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 NLE1Q9NVX2 485 aaPredicted RBP5.47□□□□□ -1.53
HDAC9-203ENST00000406072 OSER1Q9NX31 292 aa5.47□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF226Q9NYT6 803 aa5.47□□□□□ -1.53
HDAC9-203ENST00000406072 CXXC1Q9P0U4 656 aaPredicted RBP5.47□□□□□ -1.53
HDAC9-203ENST00000406072 LRFN1Q9P244 771 aa5.47□□□□□ -1.53
HDAC9-203ENST00000406072 FBXL4Q9UKA2 621 aa5.47□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF736B4DX44 427 aaPredicted RBP5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF878C9JN71 531 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 MTX2O75431 263 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 CFDP00746 253 aaPredicted RBP5.46□□□□□ -1.53
HDAC9-203ENST00000406072 C6P13671 934 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ITGB8P26012 769 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 FRKP42685 505 aaPredicted RBP5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ILKQ13418 452 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF79Q15937 498 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 RPE65Q16518 533 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 C4orf17Q53FE4 359 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 TMEM164Q5U3C3 297 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 LILRA6Q6PI73 481 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 SUSD1Q6UWL2 747 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 P4HA3Q7Z4N8 544 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 CD163Q86VB7 1156 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 CACUL1Q86Y37 369 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF679Q8IYX0 411 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF683Q8IZ20 524 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 SLC30A7Q8NEW0 376 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 HMGCLL1Q8TB92 370 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 GRHL3Q8TE85 626 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 BSCL2Q96G97 398 aaPredicted RBP5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ACPTQ9BZG2 426 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 SLC6A16Q9GZN6 736 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 NELFAQ9H3P2 528 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 BCO1Q9HAY6 547 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 SPACA1Q9HBV2 294 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 BRWD1Q9NSI6 2320 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 CD84Q9UIB8 345 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 GPR160Q9UJ42 338 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 FBXW2Q9UKT8 454 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 INSL6Q9Y581 213 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 V9GYH0 126 aa5.46□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF638Q14966 1978 aaKnown RBP5.46□□□□□ -1.53
HDAC9-203ENST00000406072 A0A1W2PPC1 479 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 MTMR11A4FU01 709 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 TMEM235A6NFC5 223 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 MCRIP1C9JLW8 97 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SYT5O00445 386 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 GAPDHSO14556 408 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 XKRYO14609 159 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 RNF13O43567 381 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SCAF4O95104 1147 aaKnown RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 KAT7O95251 611 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 OR13C7P0DN81 318 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 F3P13726 295 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 MGMTP16455 207 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 HNF1AP20823 631 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 TACR2P21452 398 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 GRPRP30550 384 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 CDKN1CP49918 316 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 CCR8P51685 355 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 GPR143P51810 404 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 EIF2B1Q14232 305 aaKnown RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 MAPK14Q16539 360 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 ATXN7L2Q5T6C5 722 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 FAAP20Q6NZ36 180 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 GLB1L2Q8IW92 636 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 MFSD6LQ8IWD5 586 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SLC7A13Q8TCU3 470 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SMPDL3BQ92485 455 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SAMD8Q96LT4 415 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF582Q96NG8 517 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 CDCA3Q99618 268 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 CMKLR1Q99788 373 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 MAGEH1Q9H213 219 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 APMAPQ9HDC9 416 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 C1GALT1Q9NS00 363 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SPG21Q9NZD8 308 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF230Q9UIE0 474 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 C14orf166Q9Y224 244 aaKnown RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 V9GY05 133 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 TARM1B6A8C7 271 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 UPK1AO00322 258 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 QSOX1O00391 747 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 LDB2O43679 373 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SCN2BO60939 215 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 POP7O75817 140 aaKnown RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 EIF3GO75821 320 aaKnown RBP eCLIP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 OR4Q2P0C623 313 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 FABP4P15090 132 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 UQCRC2P22695 453 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 TAGLN2P37802 199 aaKnown RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 PNLIPRP1P54315 467 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 CASP6P55212 293 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 RAP1AP62834 184 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 GAS6Q14393 721 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 EBPQ15125 230 aaKnown RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 ZNHIT3Q15649 155 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-203ENST00000406072 SSX1Q16384 188 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 FBXL22Q6P050 247 aa5.46□□□□□ -1.54
HDAC9-203ENST00000406072 PODNL1Q6PEZ8 512 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms