RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 SPRR3Q9UBC9 169 aa9.74□□□□□ -0.85
PDE4D-206ENST00000405053 STOML1Q9UBI4 398 aa9.74□□□□□ -0.85
PDE4D-206ENST00000405053 NPIPA1Q9UND3 350 aa9.74□□□□□ -0.85
PDE4D-206ENST00000405053 SLC6A5Q9Y345 797 aa9.74□□□□□ -0.85
PDE4D-206ENST00000405053 MED12Q93074 2177 aa9.74□□□□□ -0.85
PDE4D-206ENST00000405053 DNAJC13O75165 2243 aa9.74□□□□□ -0.85
PDE4D-206ENST00000405053 TRAV36DV7A0A075B6V5 113 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ZC3H12DA2A288 527 aaKnown RBP9.73□□□□□ -0.85
PDE4D-206ENST00000405053 OR14I1A6ND48 311 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ANPEPP15144 967 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 CPN1P15169 458 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ZNF708P17019 499 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 POU3F2P20265 443 aaPredicted RBP9.73□□□□□ -0.85
PDE4D-206ENST00000405053 IST1P53990 364 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 CTBP2P56545 445 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 CLDN15P56746 228 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 CLDN18P56856 261 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 PRKCDQ05655 676 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 MICAQ29983 383 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 CTU2Q2VPK5 515 aaKnown RBP9.73□□□□□ -0.85
PDE4D-206ENST00000405053 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ZNF770Q6IQ21 691 aaPredicted RBP9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ARHGAP11AQ6P4F7 1023 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 SHQ1Q6PI26 577 aaKnown RBP9.73□□□□□ -0.85
PDE4D-206ENST00000405053 POMZP3Q6PJE2 187 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 TBPL2Q6SJ96 375 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ZNF730Q6ZMV8 503 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ESPNLQ6ZVH7 1005 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 TMEM179BQ7Z7N9 219 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 GGNQ86UU5 652 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 GHDCQ8N2G8 530 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 SVOPLQ8N434 492 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 OR4K5Q8NGD3 323 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 OR5K1Q8NHB7 308 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 LIPHQ8WWY8 451 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ARL5BQ96KC2 179 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 KLHL15Q96M94 604 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 TIMP4Q99727 224 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 PTDSS2Q9BVG9 487 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 KLHL4Q9C0H6 718 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 OR11A1Q9GZK7 315 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 PRDM14Q9GZV8 571 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 LDAHQ9H6V9 325 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 RNPEPL1Q9HAU8 725 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 ASF1BQ9NVP2 202 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 TMCC3Q9ULS5 477 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 TRAPPC4Q9Y296 219 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 MED31Q9Y3C7 131 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 HDGFL3Q9Y3E1 203 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 U3KQV3 271 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 CFAP46Q8IYW2 2715 aa9.73□□□□□ -0.85
PDE4D-206ENST00000405053 SMG1Q96Q15 3661 aaKnown RBP9.72□□□□□ -0.85
PDE4D-206ENST00000405053 A0A0J9YW62 118 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 FTCDNL1E5RQL4 147 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 H0Y3Z8 333 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 H3BML4 177 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 KLF4O43474 513 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 OR2T1O43869 369 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 E2F6O75461 281 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 CCNB2O95067 398 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 PMS2P2O95744 297 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 CCNA2P20248 432 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 SHC1P29353 583 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 OMPP47874 163 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 STARP49675 285 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 CLDN20P56880 219 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 LSM11P83369 360 aaKnown RBP eCLIP9.72□□□□□ -0.85
PDE4D-206ENST00000405053 PPP1R8Q12972 351 aaKnown RBP9.72□□□□□ -0.85
PDE4D-206ENST00000405053 MYBPHQ13203 477 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 TMEM176BQ3YBM2 270 aaPredicted RBP9.72□□□□□ -0.85
PDE4D-206ENST00000405053 PRR30Q53SZ7 412 aaPredicted RBP9.72□□□□□ -0.85
PDE4D-206ENST00000405053 FAM69AQ5T7M9 428 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 C1QL3Q5VWW1 255 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 C1orf94Q6P1W5 598 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 TMPPEQ6ZT21 453 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 FGD2Q7Z6J4 655 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 HIPK1Q86Z02 1210 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 NRMQ8IXM6 262 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 PFN4Q8NHR9 129 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 MFSD8Q8NHS3 518 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 TAAR8Q969N4 342 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 MIB2Q96AX9 1013 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 SARAFQ96BY9 339 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 KTI12Q96EK9 354 aaPredicted RBP9.72□□□□□ -0.85
PDE4D-206ENST00000405053 WDYHV1Q96HA8 205 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 OSBPL10Q9BXB5 764 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 GABARAPL1Q9H0R8 117 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 SEMA6AQ9H2E6 1030 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 TMEM185BQ9H7F4 350 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 COQ10BQ9H8M1 238 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 C20orf141Q9NUB4 165 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 NKX1-2Q9UD57 310 aaPredicted RBP9.72□□□□□ -0.85
PDE4D-206ENST00000405053 COL6A6A6NMZ7 2263 aa9.72□□□□□ -0.85
PDE4D-206ENST00000405053 A0A1B0GTH9 108 aa9.71□□□□□ -0.86
PDE4D-206ENST00000405053 LIPT2A6NK58 231 aa9.71□□□□□ -0.86
PDE4D-206ENST00000405053 ENO4A6NNW6 628 aa9.71□□□□□ -0.86
PDE4D-206ENST00000405053 TTLL8A6PVC2 850 aa9.71□□□□□ -0.86
PDE4D-206ENST00000405053 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.86
PDE4D-206ENST00000405053 DNPH1O43598 174 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms