RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TSSK6Q9BXA6 273 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 POLDIP3Q9BY77 421 aaKnown RBP19.1■□□□□ 0.65
TPM1-208ENST00000404484 GALNT9Q9HCQ5 603 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 CCNB1IP1Q9NPC3 277 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 CLN6Q9NWW5 311 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 TRIM64CA6NLI5 447 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 GNB5O14775 395 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 ITGB2P05107 769 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 GABRB1P18505 474 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 FMO3P31513 532 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 CASP3P42574 277 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 RPL5P46777 297 aaKnown RBP19.09■□□□□ 0.65
TPM1-208ENST00000404484 Q0VFX4 171 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 CDC20Q12834 499 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 FCRLBQ6BAA4 426 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 ZNF773Q6PK81 442 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 OR2T33Q8NG76 320 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 APH1BQ8WW43 257 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 IPCEF1Q8WWN9 437 aaPredicted RBP19.09■□□□□ 0.65
TPM1-208ENST00000404484 PLA2G12AQ9BZM1 189 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 VCX3AQ9NNX9 186 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 PLCXD1Q9NUJ7 323 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 TEKT2Q9UIF3 430 aa19.09■□□□□ 0.65
TPM1-208ENST00000404484 CHCHD2Q9Y6H1 151 aaPredicted RBP19.09■□□□□ 0.65
TPM1-208ENST00000404484 FAM47E-STBD1D6RA91 191 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 ATXN7O15265 892 aaPredicted RBP19.08■□□□□ 0.65
TPM1-208ENST00000404484 GMFGO60234 142 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 MRPS14O60783 128 aaKnown RBP19.08■□□□□ 0.65
TPM1-208ENST00000404484 FAM20BO75063 409 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 HMGN1P05114 100 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 PTGDSP41222 190 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 PCYT1AP49585 367 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 CDH15P55291 814 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 SMARCD3Q6STE5 483 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 OAFQ86UD1 273 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 CYP4Z2PQ8N1L4 340 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 IQCF1Q8N6M8 205 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 OR8D4Q8NGM9 314 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 UBE2FQ969M7 185 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 OR52D1Q9H346 318 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 TVP23BQ9NYZ1 205 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 OSGIN1Q9UJX0 560 aa19.08■□□□□ 0.65
TPM1-208ENST00000404484 KALRNO60229 2985 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 IGKV1D-42A0A075B6H8 117 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 SLC25A12O75746 678 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 DLX5P56178 289 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 AIMP2Q13155 320 aaKnown RBP19.07■□□□□ 0.64
TPM1-208ENST00000404484 PGGHGQ32M88 737 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 MEDAGQ5VYS4 303 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 C5orf46Q6UWT4 87 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 RTL4Q6ZR62 310 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 OR13C2Q8NGS9 318 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 PAQR8Q8TEZ7 354 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 SAMD8Q96LT4 415 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 MED17Q9NVC6 651 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 BAIAP2Q9UQB8 552 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 SIGLEC7Q9Y286 467 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 SNX5Q9Y5X3 404 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 BOD1L1Q8NFC6 3051 aa19.07■□□□□ 0.64
TPM1-208ENST00000404484 OR7A10O76100 309 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ZNF41P51814 821 aaPredicted RBP19.06■□□□□ 0.64
TPM1-208ENST00000404484 TOMM34Q15785 309 aaPredicted RBP19.06■□□□□ 0.64
TPM1-208ENST00000404484 SNAPC1Q16533 368 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 DEFB109BQ30KR1 87 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ZBED5Q49AG3 693 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 CLEC12AQ5QGZ9 265 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ACER2Q5QJU3 275 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 DCAF10Q5QP82 559 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 TMEM201Q5SNT2 666 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 SLC25A30Q5SVS4 291 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 SLC22A10Q63ZE4 541 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 BICRALQ6AI39 1079 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ACSM5Q6NUN0 579 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 CCDC103Q8IW40 242 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 WBP1Q96G27 269 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 THOC3Q96J01 351 aaKnown RBP19.06■□□□□ 0.64
TPM1-208ENST00000404484 FRMD6Q96NE9 622 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 NDEL1Q9GZM8 345 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 PTGES2Q9H7Z7 377 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 SH2D2AQ9NP31 389 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ABI3Q9P2A4 366 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ZNF337Q9Y3M9 751 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 TMED7-TICAM2A0A0A6YYA0 188 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ANKRD33BA6NCL7 494 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 A6NHS1 94 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 C17orf51A8MQB3 221 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 XPNPEP2O43895 674 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 MAN1A2O60476 641 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 SLC6A6P31641 620 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ANKDD1AQ495B1 522 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 FAM26EQ8N5C1 309 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 SIRT6Q8N6T7 355 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ZNF540Q8NDQ6 660 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 OR4K17Q8NGC6 315 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 LIPHQ8WWY8 451 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 SLC39A7Q92504 469 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 PLEKHA8Q96JA3 519 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 ANGPTL4Q9BY76 406 aa19.06■□□□□ 0.64
TPM1-208ENST00000404484 DUSP21Q9H596 190 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms