RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 LYZL6O75951 148 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 THBS1P07996 1170 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 NUDT7P0C024 238 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 CXCR1P25024 350 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 HOXC12P31275 282 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 ACAA2P42765 397 aaKnown RBP11.79□□□□□ -0.52
SDF4-203ENST00000403997 COPZ1P61923 177 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 AGKQ53H12 422 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 ZNF836Q6ZNA1 936 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 ZNF704Q6ZNC4 412 aaPredicted RBP11.79□□□□□ -0.52
SDF4-203ENST00000403997 C20orf204Q6ZNR8 217 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 P3H2Q8IVL5 708 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 FUNDC1Q8IVP5 155 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 UBE2J2Q8N2K1 259 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 CLIP4Q8N3C7 705 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 CADM2Q8N3J6 435 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 WFDC11Q8NEX6 87 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 SPDL1Q96EA4 605 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 PIP5K1AQ99755 562 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 USB1Q9BQ65 265 aaKnown RBP11.79□□□□□ -0.52
SDF4-203ENST00000403997 NAA11Q9BSU3 229 aaPredicted RBP11.79□□□□□ -0.52
SDF4-203ENST00000403997 ADAM19Q9H013 955 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 NGBQ9NPG2 151 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 ACANP16112 2415 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 DSCAMO60469 2012 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 IGKV3D-15A0A087WSY6 115 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
SDF4-203ENST00000403997 GPR171O14626 319 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 ARHGEF9O43307 516 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 EIF1BO60739 113 aaKnown RBP11.78□□□□□ -0.52
SDF4-203ENST00000403997 IGHV3-9P01782 118 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 NCF2P19878 526 aaPredicted RBP11.78□□□□□ -0.52
SDF4-203ENST00000403997 EDNRAP25101 427 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 MAP2K6P52564 334 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 SLC35A1P78382 337 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 FADDQ13158 208 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 TAB1Q15750 504 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 STK11Q15831 433 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 ZSWIM7Q19AV6 140 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 ZNF311Q5JNZ3 666 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 LSRQ86X29 649 aaPredicted RBP11.78□□□□□ -0.52
SDF4-203ENST00000403997 CKAP2Q8WWK9 683 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 MAL2Q969L2 176 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 THOC1Q96FV9 657 aaKnown RBP11.78□□□□□ -0.52
SDF4-203ENST00000403997 SPATA9Q9BWV2 254 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 A4GALTQ9NPC4 353 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 SLC25A37Q9NYZ2 338 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 SLAMF8Q9P0V8 285 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 PRDM4Q9UKN5 801 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 IFT52Q9Y366 437 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 MTORP42345 2549 aa11.78□□□□□ -0.52
SDF4-203ENST00000403997 ZNF716A6NP11 495 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 C5orf58C9J3I9 102 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 RAMP1O60894 148 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 MRPL33O75394 65 aaKnown RBP11.77□□□□□ -0.53
SDF4-203ENST00000403997 PGM3O95394 542 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 CNOT4O95628 575 aaKnown RBP11.77□□□□□ -0.53
SDF4-203ENST00000403997 IMPDH2P12268 514 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 IGHV1-2P23083 117 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 ATP4BP51164 291 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 SLC16A1P53985 500 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 H3F3AP84243 136 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 SQLEQ14534 574 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 PAGE3Q5JUK9 113 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 RNF220Q5VTB9 566 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 PRAMEF8Q5VWM4 474 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 PRAMEF7Q5VXH5 474 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 WBP2NLQ6ICG8 309 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 APH1AQ96BI3 265 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 MUCL1Q96DR8 90 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 MAGEB18Q96M61 343 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 TMEM204Q9BSN7 226 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 POTEKPQ9BYX7 375 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 ESRP2Q9H6T0 727 aaKnown RBP11.77□□□□□ -0.53
SDF4-203ENST00000403997 BCL2L10Q9HD36 194 aa11.77□□□□□ -0.53
SDF4-203ENST00000403997 FBN3Q75N90 2809 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 CIB4A0PJX0 185 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 CCT8L1PA6NM43 557 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 HS3ST1O14792 307 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 CLOCKO15516 846 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 GPIP06744 558 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 CD3EP07766 207 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 BMP2P12643 396 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 PRG2P13727 222 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 FOSL1P15407 271 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 HOXB9P17482 250 aaPredicted RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 GGT1P19440 569 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 PPIBP23284 216 aaKnown RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 ADSLP30566 484 aaPredicted RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 NTF4P34130 210 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 IDUAP35475 653 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 IRX1P78414 480 aaPredicted RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 BNIP2Q12982 314 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms