RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ADAM5Q6NVV9 412 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 ZNF836Q6ZNA1 936 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 PEX5LQ8IYB4 626 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 CIARTQ8N365 385 aaPredicted RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 KBTBD8Q8NFY9 601 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 LILRB1Q8NHL6 650 aaPredicted RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 ESRP2Q9H6T0 727 aaKnown RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 RMND5AQ9H871 391 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 MTHFD2LQ9H903 347 aaPredicted RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 TPT1P8Q9HAU6 139 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 NGBQ9NPG2 151 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 ZNF701Q9NV72 531 aaPredicted RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 RLIMQ9NVW2 624 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 ABCA2Q9BZC7 2435 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 JMJD1CQ15652 2540 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 ZC3H12DA2A288 527 aaKnown RBP13.57□□□□□ -0.24
TPM1-207ENST00000403994 CDHR4A6H8M9 788 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 TRIM64A6NGJ6 449 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 ZNF208O43345 1280 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 TMCC2O75069 709 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 ANP32DO95626 131 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 IGHV3-9P01782 118 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 CRATP43155 626 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 POLR2JP52435 117 aaKnown RBP13.57□□□□□ -0.24
TPM1-207ENST00000403994 CRISP3P54108 245 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 OR2B6P58173 313 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 DSTNP60981 165 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 H3F3AP84243 136 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 PPA1Q15181 289 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 RPS26P11Q5JNZ5 115 aaPredicted RBP13.57□□□□□ -0.24
TPM1-207ENST00000403994 C6orf10Q5SRN2 563 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 RNF220Q5VTB9 566 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 CLEC9AQ6UXN8 241 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 Q71RC1 249 aaPredicted RBP13.57□□□□□ -0.24
TPM1-207ENST00000403994 VRK2Q86Y07 508 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 CCDC103Q8IW40 242 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 MIER2Q8N344 545 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 ZNF433Q8N7K0 673 aaPredicted RBP13.57□□□□□ -0.24
TPM1-207ENST00000403994 FBXW5Q969U6 566 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 APH1AQ96BI3 265 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 DDIT4LQ96D03 193 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 ITCHQ96J02 903 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 NPAP1Q9NZP6 1156 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 CALML5Q9NZT1 146 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 TMEM181Q9P2C4 612 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 MALT1Q9UDY8 824 aa13.57□□□□□ -0.24
TPM1-207ENST00000403994 ZNF443Q9Y2A4 671 aaPredicted RBP13.57□□□□□ -0.24
TPM1-207ENST00000403994 NOSIPQ9Y314 301 aaKnown RBP13.57□□□□□ -0.24
TPM1-207ENST00000403994 FAM234BA2RU67 622 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 GPR171O14626 319 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 RAD51DO75771 328 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 HEXAP06865 529 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 TFPTP0C1Z6 253 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 GKN3PP0CG01 181 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 IMPDH2P12268 514 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 HOXB9P17482 250 aaPredicted RBP13.56□□□□□ -0.24
TPM1-207ENST00000403994 GGT1P19440 569 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 NTF4P34130 210 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 RPS4XP62701 263 aaKnown RBP13.56□□□□□ -0.24
TPM1-207ENST00000403994 LTBQ06643 244 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 ZNF672Q499Z4 452 aaPredicted RBP13.56□□□□□ -0.24
TPM1-207ENST00000403994 TIMM23BQ5SRD1 257 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 AGBL2Q5U5Z8 902 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 FBXW9Q5XUX1 488 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 ZNF440Q8IYI8 595 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 UBE2J2Q8N2K1 259 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 OR52P1PQ8NH57 321 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 SLC38A5Q8WUX1 472 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 GTF2H4Q92759 462 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 NEUROG1Q92886 237 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 TMEM19Q96HH6 336 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 C7orf26Q96N11 449 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 TRIM2Q9C040 744 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 LAMP3Q9UQV4 416 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 TRAPPC4Q9Y296 219 aa13.56□□□□□ -0.24
TPM1-207ENST00000403994 HIVEP2P31629 2446 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 DPRXA6NFQ7 191 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 OR5H1A6NKK0 313 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 EIF1BO60739 113 aaKnown RBP13.55□□□□□ -0.24
TPM1-207ENST00000403994 PGM3O95394 542 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 SOD3P08294 240 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 DANCRP0C864 163 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 ACAA2P42765 397 aaKnown RBP13.55□□□□□ -0.24
TPM1-207ENST00000403994 MRPL19P49406 292 aaKnown RBP13.55□□□□□ -0.24
TPM1-207ENST00000403994 MAP2K6P52564 334 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 SLC35A1P78382 337 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 EPGNQ6UW88 154 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 CASP12Q6UXS9 341 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 BDH2Q9BUT1 245 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 ADAM19Q9H013 955 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 PAIP1Q9H074 479 aaKnown RBP13.55□□□□□ -0.24
TPM1-207ENST00000403994 TCF7L2Q9NQB0 619 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 SLC9A8Q9Y2E8 581 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 MAGED1Q9Y5V3 778 aaPredicted RBP13.55□□□□□ -0.24
TPM1-207ENST00000403994 FLVCR1Q9Y5Y0 555 aa13.55□□□□□ -0.24
TPM1-207ENST00000403994 FAM171A2A8MVW0 826 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 SMAD7O15105 426 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms