RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MAP3K8P41279 467 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 PKNOX1P55347 436 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 CCDC173Q0VFZ6 552 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 DDX39BQ13838 428 aaKnown RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 MESDQ14696 234 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 KYAT1Q16773 422 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 CARD16Q5EG05 197 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 C19orf35Q6ZS72 473 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 ARCQ7LC44 396 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 CCDC50Q8IVM0 306 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 LRRC75A-AS1Q8N1F1 130 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 TMEM252Q8N6L7 170 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 ALLCQ8N6M5 410 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 SDR9C7Q8NEX9 313 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR4K14Q8NGD5 310 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR13C2Q8NGS9 318 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 CHCHD10Q8WYQ3 142 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 ST8SIA1Q92185 356 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 FGGYQ96C11 551 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 RPUSD4Q96CM3 377 aaKnown RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 NPY6RQ99463 290 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 FMO2Q99518 471 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 COPS8Q99627 209 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 NAT9Q9BTE0 207 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 ANP32EQ9BTT0 268 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 TRIM62Q9BVG3 475 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 RBKSQ9H477 322 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 METTL7AQ9H8H3 244 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 FN3KRPQ9HA64 309 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 MCCC2Q9HCC0 563 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 THUMPD1Q9NXG2 353 aaKnown RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 C6orf203Q9P0P8 240 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 COX16Q9P0S2 106 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 TMEM9Q9P0T7 183 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 PIGLQ9Y2B2 252 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 KIR2DL5BA0A0G2JN68 375 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 KIR2DL5BA0A0G2JPC4 375 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 HELTA6NFD8 242 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 SNTNA6NMZ2 147 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 IDSB3KWA1 339 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 E7ENQ6 273 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 PRKAB2O43741 272 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 PALMO75781 387 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 LGI1O95970 557 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 SEMG1P04279 462 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 GAPDHP04406 335 aaKnown RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 DBTP11182 482 aaKnown RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 RPS2P15880 293 aaKnown RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 YWHABP31946 246 aaKnown RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 CCR1P32246 355 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 DUSP3P51452 185 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 TPMTP51580 245 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 CDK16Q00536 496 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 NCBP1Q09161 790 aaKnown RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 BST1Q10588 318 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 HERPUD1Q15011 391 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 DUSP7Q16829 419 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 ISXQ2M1V0 245 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR52E8Q6IFG1 317 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 UNQ9370/PRO34162Q6UXP9 181 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 DNM1P46Q6ZS02 220 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 TMEM179BQ7Z7N9 219 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 ECHDC2Q86YB7 292 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 KIR2DL5AQ8N109 375 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF740Q8NDX6 193 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 KIR2DL5BQ8NHK3 375 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 DNAJA4Q8WW22 397 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 MRPS31Q92665 395 aaKnown RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 UBE2E3Q969T4 207 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 EFHD2Q96C19 240 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 CMTM7Q96FZ5 175 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 C16orf74Q96GX8 76 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 C12orf42Q96LP6 360 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 CLCC1Q96S66 551 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 YTHDF1Q9BYJ9 559 aaKnown RBP2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR51J1Q9H342 316 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 SMYD3Q9H7B4 428 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 TREM2Q9NZC2 230 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 B4GALT7Q9UBV7 327 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 SEC14L3Q9UDX4 400 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 IFT52Q9Y366 437 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 UGT2A1Q9Y4X1 527 aa2.79□□□□□ -1.96
HMGB1P17-201ENST00000403495 NSG1A0A0A6YYJ2 146 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGHV7-81A0A0B4J1V7 117 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 A0A0G2JLM5 398 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 A6NIZ1 184 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 UBXN8O00124 270 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 HIP1O00291 1037 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 HAT1O14929 419 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 LALBAP00709 142 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGHV3-48P01763 117 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF19P17023 458 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 COX5AP20674 150 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 SHMT2P34897 504 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 CEBPDP49716 269 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 KLK7P49862 253 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 SLC26A2P50443 739 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 CAV2P51636 162 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 RAP1BP61224 184 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 TGFBR3Q03167 851 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms