RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 RASD1Q9Y272 281 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 ACOD1A6NK06 481 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 FANCGO15287 622 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 SC5DO75845 299 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 SNRNP70P08621 437 aaKnown RBP12.83□□□□□ -0.36
VAPA-202ENST00000400000 MTCP1P56278 107 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 MARCH3Q86UD3 253 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 SUMF1Q8NBK3 374 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 SCML1Q9UN30 329 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 CACNG2Q9Y698 323 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 SNAPC5O75971 98 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 CBR1P16152 277 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 M6PRP20645 277 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 GIFP27352 417 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 ACTBP60709 375 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 ACTG1P63261 375 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 RBMXL3Q8N7X1 1067 aaKnown RBP12.83□□□□□ -0.36
VAPA-202ENST00000400000 FAM117AQ9C073 453 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 OR52D1Q9H346 318 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 DVL1O14640 695 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 PRAMEF4O60810 478 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 HNF1AP20823 631 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SSR4P51571 173 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 CDK5R2Q13319 367 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 CYP4V2Q6ZWL3 525 aaPredicted RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 LILRA3Q8N6C8 439 aaPredicted RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 ZNF566Q969W8 418 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 WDR83Q9BRX9 315 aaKnown RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 SGPP1Q9BX95 441 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 EMC3Q9P0I2 261 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 TRBV4-1A0A0J9YWV2 114 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 TSPAN11A1L157 253 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 H0Y8X5 98 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 MT-CO2P00403 227 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 IRS1P35568 1242 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 BIDP55957 195 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 CXADRP78310 365 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 MRPS34P82930 218 aaKnown RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 FAM43BQ6ZT52 329 aaPredicted RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 LKAAEAR1Q8TD35 194 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 CMSS1Q9BQ75 279 aaKnown RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 TMEM59Q9BXS4 323 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 TAS2R16Q9NYV7 291 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 GNG12Q9UBI6 72 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 M0QZQ0 153 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SURF4O15260 269 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 CST9Q5W186 159 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SLC7A5P1Q8MH63 180 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 FNDC9Q8TBE3 224 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SLC6A5Q9Y345 797 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 ZCWPW2A0A1B0GU75 182 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 TOR1AO14656 332 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SLC5A2P31639 672 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 CARD18P57730 90 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 MLF2Q15773 248 aaPredicted RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 BAIAP2L2Q6UXY1 529 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 TMIEQ8NEW7 156 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 OR2T35Q8NGX2 323 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 PPP1R35Q8TAP8 253 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SLC38A1Q9H2H9 487 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 HHATLQ9HCP6 504 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 FAM208AQ9UK61 1670 aaKnown RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 K7EPK0 472 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 LYRM1O43325 122 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 AKAIN1P0CW23 69 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 MC2RQ01718 297 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 GK3PQ14409 553 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 KIR2DS3Q14952 304 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 DMRTC1Q5HYR2 192 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 LDLRAD1Q5T700 205 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 FAM198BQ6UWH4 519 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 AAED1Q7RTV5 226 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 FAM71E2Q8N5Q1 922 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 PIGTQ969N2 578 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 THOC3Q96J01 351 aaKnown RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 SLC30A3Q99726 388 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 THAP7Q9BT49 309 aaPredicted RBP12.82□□□□□ -0.36
VAPA-202ENST00000400000 TNFRSF19Q9NS68 423 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 ZNF337Q9Y3M9 751 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 ARFGEF2Q9Y6D5 1785 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SLC43A1O75387 559 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 HPRP00739 348 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 PMP2P02689 132 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 MTHFD2P13995 350 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 TACR3P29371 465 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 CA5AP35218 305 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 OPRL1P41146 370 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 MYBPHQ13203 477 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 UBAC2Q8NBM4 344 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SIMC1Q8NDZ2 872 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 MIB2Q96AX9 1013 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 SLC22A12Q96S37 553 aa12.82□□□□□ -0.36
VAPA-202ENST00000400000 HOXD9P28356 352 aaPredicted RBP12.81□□□□□ -0.36
VAPA-202ENST00000400000 EPHA5P54756 1037 aa12.81□□□□□ -0.36
VAPA-202ENST00000400000 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms