RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 KLHL13Q9P2N7 655 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 USP22Q9UPT9 525 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ANGPT4Q9Y264 503 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 M0QX08 132 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SLC22A2O15244 555 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF208O43345 1280 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CYTIPO60759 359 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RAMP1O60894 148 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SERPINB7O75635 380 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PMS2P2O95744 297 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 YES1P07947 543 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 IMPDH2P12268 514 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 POU2F1P14859 743 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 DRD4P21917 467 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FKBP2P26885 142 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 HTR2AP28223 471 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CCKARP32238 428 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CD79BP40259 229 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CLK1P49759 484 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GNGT1P63211 74 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RBBP4Q09028 425 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RASGEF1BQ0VAM2 473 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 DUSP7Q16829 419 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TMEM201Q5SNT2 666 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 DHRS4L2Q6PKH6 230 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TMEM200AQ86VY9 491 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TREML1Q86YW5 311 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CCDC103Q8IW40 242 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SLC43A2Q8N370 569 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PCYOX1LQ8NBM8 494 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 C3orf49Q96BT1 292 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF300Q96RE9 604 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ECSITQ9BQ95 431 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TMEM181Q9P2C4 612 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KLHL9Q9P2J3 617 aa12.54□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PRORSD1PA6NEY8 169 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TPST2O60704 377 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CCDC22O60826 627 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 NPPAP01160 153 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 EPXP11678 715 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 COX4I1P13073 169 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FPR1P21462 350 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 EDNRAP25101 427 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 UGT2B10P36537 528 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 OR2B6P58173 313 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 VMACQ2NL98 169 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CPLX4Q7Z7G2 160 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ATG4DQ86TL0 474 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 OR8J3Q8NGG0 315 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RP9Q8TA86 221 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FAM222BQ8WU58 562 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SLC35B4Q969S0 331 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KLHL4Q9C0H6 718 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 HRNRQ86YZ3 2850 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SH3D21A4FU49 640 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CCT8L1PA6NM43 557 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 AIM2O14862 343 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SNX3O60493 162 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CTAG2O75638 210 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PCGF2P35227 344 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MAP2K6P52564 334 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 H3F3AP84243 136 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GPR32P1Q8NGA4 272 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF583Q96ND8 569 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 WFIKKN1Q96NZ8 548 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SH3GL1Q99961 368 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GP6Q9HCN6 339 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GID8Q9NWU2 228 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KLHL28Q9NXS3 571 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ELOVL5Q9NYP7 299 aa12.52□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 A6NNC1 897 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZNF716A6NP11 495 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 C16orf97H3BN30 126 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 M0R3H8 397 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CRYBA2P53672 197 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 RGS8P57771 180 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CEACAM7Q14002 265 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OR7A5Q15622 319 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ABLIM2Q6H8Q1 611 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TFAP2EQ6VUC0 442 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 STAC2Q6ZMT1 411 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 STK32CQ86UX6 486 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 LSMEM1Q8N8F7 131 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OR52E4Q8NGH9 312 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NRGNQ92686 78 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TAMM41Q96BW9 452 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZHX1-C8orf76Q96EF9 292 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NSRP1Q9H0G5 558 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms