RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 KIF25Q9UIL4 384 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 ACSL5Q9ULC5 683 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 PPIL1Q9Y3C6 166 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 STON1Q9Y6Q2 735 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 TP53BP1Q12888 1972 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SCN2AQ99250 2005 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SCN10AQ9Y5Y9 1956 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 A0A0G2JPF8 293 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 A0A1W2PR48 441 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 HNRNPCL3B7ZW38 293 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 DLL1O00548 723 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 IMPA2O14732 288 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 RLN2P04090 185 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 HNRNPCL4P0DMR1 293 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 MAT2AP31153 395 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SEC61A1P61619 476 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 KRT33BQ14525 404 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC9A5Q14940 896 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 LY6G5CQ5SRR4 150 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 TMEM69Q5SWH9 247 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 PARS2Q7L3T8 475 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 RASGRP3Q8IV61 690 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 FAM98AQ8NCA5 519 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 OR4C6Q8NH72 309 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 WBP1Q96G27 269 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 NPAS1Q99742 590 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC46A2Q9BY10 475 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 RHBGQ9H310 441 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 EVA1AQ9H8M9 152 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC6A20Q9NP91 592 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 WASH6PQ9NQA3 447 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 STARD7Q9NQZ5 370 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 CAMK2AQ9UQM7 478 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 GON4LQ3T8J9 2241 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 CACNA1IQ9P0X4 2223 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 KRBOX1C9JBD0 128 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 PYCARD-AS1I3L0S3 204 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 KRT33AO76009 404 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SBK2P0C263 348 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 TMIGD3P0DMS9 266 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 LIPCP11150 499 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 STPG1Q5TH74 334 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 DCAF12L2Q5VW00 463 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 ZC3H14Q6PJT7 736 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 GSG1LQ6UXU4 331 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 WDR88Q6ZMY6 472 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.12□□□□□ -0.956e-8■■■□□ 14.6
PTCHD4-202ENST00000398738 MBOAT2Q6ZWT7 520 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 RNF180Q86T96 592 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 GID4Q8IVV7 300 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 BVESQ8NE79 360 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SMIM4Q8WVI0 70 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 FCAMRQ8WWV6 532 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 DVL3Q92997 716 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 IGSF21Q96ID5 467 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 MLXQ9UH92 298 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 WDR45Q9Y484 360 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 WNT6Q9Y6F9 365 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 ATP1B1P05026 303 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 CTSBP07858 339 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 IL9P15248 144 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF85Q03923 595 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 KCNAB1Q14722 419 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF169Q14929 603 aaPredicted RBP9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 OTPQ5XKR4 325 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 OR52E2Q8NGJ4 325 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC38A3Q99624 504 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 ADAP2Q9NPF8 381 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 IL36AQ9UHA7 158 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 RIIAD1A6NNX1 92 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 CCL16O15467 120 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 PLPP2O43688 288 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 NFATC1O95644 943 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 RPLP2P05387 115 aaKnown RBP9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 UGT2B7P16662 529 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 H2BFSP57053 126 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 FXYD6P3P58550 94 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 PRR5P85299 388 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 C4orf46Q504U0 113 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 AKIRIN2Q53H80 203 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 FIGNL1Q6PIW4 674 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 NDUFAF7Q7L592 441 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 TMED4Q7Z7H5 227 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 TPRA1Q86W33 373 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 TTLQ8NG68 377 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 SYNPRQ8TBG9 265 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 DNAJA3Q96EY1 480 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 AHCYL2Q96HN2 611 aaKnown RBP9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 PGLYRP3Q96LB9 341 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 HS6ST2Q96MM7 605 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 MICU1Q9BPX6 476 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 LDAHQ9H6V9 325 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 MED11Q9P086 117 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 KLHL9Q9P2J3 617 aa9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF346Q9UL40 294 aaKnown RBP9.11□□□□□ -0.95
PTCHD4-202ENST00000398738 UBE2QL1A1L167 161 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 C4orf51C9J302 202 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ABLIM3O94929 683 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 AIFM1O95831 613 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms