RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 H3BN98 237 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 ZIC3O60481 467 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 IL11P20809 199 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 GGT2P36268 569 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 C1QL3Q5VWW1 255 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 OR13C2Q8NGS9 318 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 SLC39A7Q92504 469 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 CHRNA9Q9UGM1 479 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 SIGLEC7Q9Y286 467 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 HTR3EA5X5Y0 456 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 NME2P1O60361 137 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 CH25HO95992 272 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 SP1P08047 785 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 RFPL3SP0C7P2 107 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 SAGP10523 405 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-203ENST00000397442 NME2P22392 152 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 ARG2P78540 354 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 TLE3Q04726 772 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 ZNF74Q16587 644 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 TMEM44Q2T9K0 475 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 UGT2A3Q6UWM9 527 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 SULF2Q8IWU5 870 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 LRRC17Q8N6Y2 441 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 CLDN22Q8N7P3 220 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 TAAR8Q969N4 342 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 ZBTB8AQ96BR9 441 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 UBQLN3Q9H347 655 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 KLHL1Q9NR64 748 aa24.87■■□□□ 1.57
CPNE1-203ENST00000397442 A8MVM7 634 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 FAM47E-STBD1D6RA91 191 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 PTP4A3O75365 173 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 TCEA1P23193 301 aaKnown RBP24.86■■□□□ 1.57
CPNE1-203ENST00000397442 ADH6P28332 368 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 ISL1P61371 349 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 LTBQ06643 244 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 SLC25A25Q6KCM7 469 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 C8orf59Q8N0T1 100 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-203ENST00000397442 OR5M1Q8NGP8 315 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 LIPHQ8WWY8 451 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 MOGAT1Q96PD6 335 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 PTDSS2Q9BVG9 487 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 OR11A1Q9GZK7 315 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 ZFP64Q9NPA5 681 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 CDH10Q9Y6N8 788 aa24.86■■□□□ 1.57
CPNE1-203ENST00000397442 URB1O60287 2271 aaKnown RBP24.86■■□□□ 1.57
CPNE1-203ENST00000397442 OR7A10O76100 309 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 EIF1P41567 113 aaKnown RBP24.85■■□□□ 1.57
CPNE1-203ENST00000397442 GTPBP8Q8N3Z3 284 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-203ENST00000397442 STK35Q8TDR2 534 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 DCBLD2Q96PD2 775 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 UBL7Q96S82 380 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-203ENST00000397442 CSAG2Q9Y5P2 127 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 TRAV36DV7A0A075B6V5 113 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 TRAV27A0A087WT01 109 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 HK1P19367 917 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 RPS5P46782 204 aaKnown RBP24.85■■□□□ 1.57
CPNE1-203ENST00000397442 GIPRP48546 466 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 TNFSF10P50591 281 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 RPS6KA3P51812 740 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 CDK5Q00535 292 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 SLX4IPQ5VYV7 408 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 THAP5Q7Z6K1 395 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 OAFQ86UD1 273 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 UBE2FQ969M7 185 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 SCMH1Q96GD3 660 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 SMAD5Q99717 465 aaKnown RBP24.85■■□□□ 1.57
CPNE1-203ENST00000397442 ENKD1Q9H0I2 346 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 OR52D1Q9H346 318 aa24.85■■□□□ 1.57
CPNE1-203ENST00000397442 BOKQ9UMX3 212 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-203ENST00000397442 ZNF208O43345 1280 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 SRD5A2P31213 254 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 MAP2K6P52564 334 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 C1orf140Q5VVS0 124 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 KRT80Q6KB66 452 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 GALNTL5Q7Z4T8 443 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 IQCF1Q8N6M8 205 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 OR51A7Q8NH64 312 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 FBLIM1Q8WUP2 373 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 TNFRSF13CQ96RJ3 184 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.84■■□□□ 1.575e-12■■■■□ 21.5
CPNE1-203ENST00000397442 MCCC2Q9HCC0 563 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 IL20RAQ9UHF4 553 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 DKKL1Q9UK85 242 aa24.84■■□□□ 1.57
CPNE1-203ENST00000397442 RPH3AQ9Y2J0 694 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-203ENST00000397442 KLF13Q9Y2Y9 288 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-203ENST00000397442 FREM3P0C091 2139 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 RRP8O43159 456 aaKnown RBP24.83■■□□□ 1.57
CPNE1-203ENST00000397442 BGLAPP02818 100 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 RPSAP08865 295 aaKnown RBP24.83■■□□□ 1.57
CPNE1-203ENST00000397442 CD46P15529 392 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 SLC9A3P48764 834 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 CD47Q08722 323 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 GINS1Q14691 196 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 CTU2Q2VPK5 515 aaKnown RBP24.83■■□□□ 1.57
CPNE1-203ENST00000397442 ZBED5Q49AG3 693 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 BROXQ5VW32 411 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 C12orf73Q69YU5 71 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 TEX47Q8TBZ9 253 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 FANK1Q8TC84 345 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 OSTF1Q92882 214 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms