RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TMEM43Q9BTV4 400 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 ZFP64Q9NPA5 681 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 SMPD3Q9NY59 655 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 BOKQ9UMX3 212 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 C15orf41Q9Y2V0 281 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 MED31Q9Y3C7 131 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 FLNCQ14315 2725 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 TMED7-TICAM2A0A0A6YYA0 188 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 KLF4O43474 513 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 SNAP29O95721 258 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 POU2F1P14859 743 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 DPP4P27487 766 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 IFNGR2P38484 337 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 CD97P48960 835 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 CTBP2P56545 445 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 PRKCDQ05655 676 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 ZNF766Q5HY98 468 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 IGFL3Q6UXB1 125 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 MEX3DQ86XN8 651 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 P3H2Q8IVL5 708 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 RBMXL3Q8N7X1 1067 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 GTPBP3Q969Y2 492 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 FAM46AQ96IP4 442 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 RDH12Q96NR8 316 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 SLC19A3Q9BZV2 496 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 UBQLN3Q9H347 655 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 KRT84Q9NSB2 600 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 C20orf141Q9NUB4 165 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 POFUT2Q9Y2G5 429 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 TMED7Q9Y3B3 224 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 NBASA2RRP1 2371 aa15.32■□□□□ 0.04
TSPAN4-205ENST00000397406 HECTD1Q9ULT8 2610 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 SHISA8B8ZZ34 492 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 FAM47E-STBD1D6RA91 191 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 KPNA4O00629 521 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 ZIC3O60481 467 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 RFPL3SP0C7P2 107 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 CXCR1P25024 350 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 SRD5A2P31213 254 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 APOBEC1P41238 236 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 GSSP48637 474 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 EGR4Q05215 589 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 TMEM44Q2T9K0 475 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 RFX4Q33E94 735 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 PRR30Q53SZ7 412 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 NHSL2Q5HYW2 709 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 POMZP3Q6PJE2 187 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 KLHL17Q6TDP4 642 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 CD300LDQ6UXZ3 194 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 GALNT5Q7Z7M9 940 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 TMEM178AQ8NBL3 297 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 GNPDA2Q8TDQ7 276 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 DNAJC9Q8WXX5 260 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 ZBTB8AQ96BR9 441 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 MBOAT4Q96T53 435 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 ZNF556Q9HAH1 456 aa15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 PAPOLBQ9NRJ5 636 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-205ENST00000397406 TMEM72A0PK05 275 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 KLRC4-KLRK1H3BQV0 150 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 EFNA2O43921 213 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 SUSD5O60279 629 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 IGF2P01344 180 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 IFI30P13284 250 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 HK1P19367 917 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 CCNA2P20248 432 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 MAKP20794 623 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 ADH6P28332 368 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 GPR4P46093 362 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 MEOX1P50221 254 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 RAD23AP54725 363 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 TSPAN31Q12999 210 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 ZIK1Q3SY52 487 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 TMPRSS11FQ6ZWK6 438 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 PARP8Q8N3A8 854 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 GTPBP8Q8N3Z3 284 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 BPIFA2Q96DR5 249 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 TOR3AQ9H497 397 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 KRCC1Q9NPI7 259 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 LUZP4Q9P127 313 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 REV1Q9UBZ9 1251 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 DKKL1Q9UK85 242 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 TMEM5Q9Y2B1 443 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 MRPS18CQ9Y3D5 142 aaKnown RBP15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 ORC6Q9Y5N6 252 aa15.3■□□□□ 0.04
TSPAN4-205ENST00000397406 TRAV17A0A0B4J275 112 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 ENO4A6NNW6 628 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 NPIPB7O75200 414 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 GLSO94925 669 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 TP53P04637 393 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 IL11P20809 199 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 FPR3P25089 353 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 EIF1P41567 113 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 UQCRFS1P47985 274 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 HSPA13P48723 471 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 IL1RL1Q01638 556 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 CRYZQ08257 329 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 HYAL4Q2M3T9 481 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 GLYR1Q49A26 553 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 ZADH2Q8N4Q0 377 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 ZFP62Q8NB50 900 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms