RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SH3D21A4FU49 640 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 SNTNA6NMZ2 147 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 GJE1A6NN92 205 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 EFSO43281 561 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 WDPCPO95876 746 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 TP53P04637 393 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 HIST1H2ABP04908 130 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 DPP4P27487 766 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 SNRPGP62308 76 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 IL5RAQ01344 420 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 FOXD4Q12950 439 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 RAPSNQ13702 412 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 TOMM34Q15785 309 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 ZNF74Q16587 644 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 HIST3H2AQ7L7L0 130 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 MDGA2Q7Z553 956 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 FANK1Q8TC84 345 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 HIST1H2ACQ93077 130 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 FAM122AQ96E09 287 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 GPA33Q99795 319 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 CCDC86Q9H6F5 360 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 ZNF696Q9H7X3 374 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 C20orf141Q9NUB4 165 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 TBC1D23Q9NUY8 699 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 UBAP1Q9NZ09 502 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 KPNA4O00629 521 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 IDH3BO43837 385 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 PIP5K1CO60331 668 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 FZD7O75084 574 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 PTP4A3O75365 173 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 NDUFB2O95178 105 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 AHSA1O95433 338 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 FUT1P19526 365 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 MAKP20794 623 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 POU1F1P28069 291 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 SLC6A6P31641 620 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 POLR2IP36954 125 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 ID4P47928 161 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 MEDAGQ5VYS4 303 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 C12orf73Q69YU5 71 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 OR5M10Q6IEU7 315 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 SLC25A25Q6KCM7 469 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 MAMDC2Q7Z304 686 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 P3H2Q8IVL5 708 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 MDS2Q8NDY4 140 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 FAM81AQ8TBF8 368 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 GPX7Q96SL4 187 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 POLDIP3Q9BY77 421 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 OR52D1Q9H346 318 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 DKKL1Q9UK85 242 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 HIF3AQ9Y2N7 669 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 SLC6A5Q9Y345 797 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 HDGFL3Q9Y3E1 203 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 PCDHGA9Q9Y5G4 932 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 KCNMB2Q9Y691 235 aa17.24■□□□□ 0.35
TSPAN4-204ENST00000397404 MASP2O00187 686 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 CDC42EP2O14613 210 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 GNB5O14775 395 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 NME2P1O60361 137 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 MRPS14O60783 128 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 APEHP13798 732 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 NME2P22392 152 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 RPS4XP62701 263 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 ARG2P78540 354 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 EGR4Q05215 589 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 MAD2L1BPQ15013 274 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 HYAL4Q2M3T9 481 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 C1orf140Q5VVS0 124 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 ARSKQ6UWY0 536 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 CCDC81Q6ZN84 652 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 ZNF227Q86WZ6 799 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 SCAIQ8N9R8 606 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 MFSD8Q8NHS3 518 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 RHOXF1Q8NHV9 184 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 FBXL2Q9UKC9 423 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 VDAC3Q9Y277 283 aa17.23■□□□□ 0.35
TSPAN4-204ENST00000397404 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 LYNP07948 512 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 SP1P08047 785 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 TSPAN19P0C672 248 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 ASAH2BP0C7U1 165 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 EPHA2P29317 976 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 GRK5P34947 590 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 GABARAPL2P60520 117 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 LSM11P83369 360 aaKnown RBP eCLIP17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 FOXF1Q12946 379 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 GINS1Q14691 196 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 ATP1A1-AS1Q5TC04 95 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 DPY19L2P2Q6ZN68 376 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 LINC00696Q6ZRV3 163 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 SLC46A3Q7Z3Q1 461 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 LNX2Q8N448 690 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 FAM98AQ8NCA5 519 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 SMAD5Q99717 465 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 TSSK6Q9BXA6 273 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 TUBA8Q9NY65 449 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 SCN3BQ9NY72 215 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 SCOCQ9UIL1 159 aa17.22■□□□□ 0.35
TSPAN4-204ENST00000397404 TMEM72A0PK05 275 aa17.21■□□□□ 0.35
TSPAN4-204ENST00000397404 C2orf72A6NCS6 295 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms