RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PAPOLBQ9NRJ5 636 aaKnown RBP21.3■■□□□ 1
TSPAN4-202ENST00000397396 RPH3AQ9Y2J0 694 aaPredicted RBP21.3■■□□□ 1
TSPAN4-202ENST00000397396 IGKV1D-42A0A075B6H8 117 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 OR2M5A3KFT3 312 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 ENO4A6NNW6 628 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 KPNA4O00629 521 aaPredicted RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 TFECO14948 347 aaPredicted RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 GASTP01350 101 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 CHMP24386 653 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 DAPP51397 102 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 ALDH6A1Q02252 535 aaKnown RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 TSPAN31Q12999 210 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 MFSD13AQ14CX5 517 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 LINC00303Q3SY05 128 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 SYT14P1Q58G82 188 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 TMPRSS11FQ6ZWK6 438 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 PARP8Q8N3A8 854 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 PFN4Q8NHR9 129 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 UCK2Q9BZX2 261 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 SMURF2Q9HAU4 748 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 MEPEQ9NQ76 525 aaPredicted RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 SMPD3Q9NY59 655 aaPredicted RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 PIP5K1CO60331 668 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 NPIPB7O75200 414 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 MT-ATP6P00846 226 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 CCNA2P20248 432 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 RFC3P40938 356 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 MAGEA5P43359 124 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 SLC9A3P48764 834 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 RAC1P63000 192 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 SLC10A1Q14973 349 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 FAM69AQ5T7M9 428 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 C1orf140Q5VVS0 124 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 IZUMO2Q6UXV1 221 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 PRICKLE2Q7Z3G6 844 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 YRDCQ86U90 279 aaKnown RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 GTPBP3Q969Y2 492 aaKnown RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 PNPLA2Q96AD5 504 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 FAM46AQ96IP4 442 aaKnown RBP21.29■■□□□ 1
TSPAN4-202ENST00000397396 ZDHHC11Q9H8X9 412 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 HDGFL3Q9Y3E1 203 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 AP4B1Q9Y6B7 739 aa21.29■■□□□ 1
TSPAN4-202ENST00000397396 EFCAB9A8MZ26 197 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 CRYABP02511 175 aaKnown RBP21.28■■□□□ 1
TSPAN4-202ENST00000397396 FAM87AP0C7U9 286 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 TCEA1P23193 301 aaKnown RBP21.28■■□□□ 1
TSPAN4-202ENST00000397396 GSSP48637 474 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 EGR4Q05215 589 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 ANKDD1AQ495B1 522 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 WIPI1Q5MNZ9 446 aaPredicted RBP21.28■■□□□ 1
TSPAN4-202ENST00000397396 RPL13AP3Q6NVV1 102 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 NIPSNAP1Q9BPW8 284 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 NDEL1Q9GZM8 345 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 FKRPQ9H9S5 495 aa21.28■■□□□ 1
TSPAN4-202ENST00000397396 TMEFF2Q9UIK5 374 aaPredicted RBP21.28■■□□□ 1
TSPAN4-202ENST00000397396 ANKRD11Q6UB99 2663 aaPredicted RBP21.27■■□□□ 1
TSPAN4-202ENST00000397396 SHISA8B8ZZ34 492 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 KLF4O43474 513 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 OR7A10O76100 309 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 SAGP10523 405 aaPredicted RBP21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 TFPIP10646 304 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 IDUAP35475 653 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 GPR4P46093 362 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 NUP107P57740 925 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 B3GALT5-AS1P59052 145 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 IL1RL1Q01638 556 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 SLC6A19Q695T7 634 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 SLC43A2Q8N370 569 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 LIPHQ8WWY8 451 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 TAPBPLQ9BX59 468 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 ZNF229Q9UJW7 825 aa21.27■□□□□ 0.99
TSPAN4-202ENST00000397396 K7EM74 188 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 HCN1O60741 890 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 POU2F1P14859 743 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 GTF2E2P29084 291 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 GFRA1P56159 465 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 ESRRGP62508 458 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 ZNF74Q16587 644 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 RASSF6Q6ZTQ3 369 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 MAMDC2Q7Z304 686 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 C10orf53Q8N6V4 93 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 CLDN22Q8N7P3 220 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 MFSD8Q8NHS3 518 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 KTI12Q96EK9 354 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 ZNF184Q99676 751 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 NPAS1Q99742 590 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 MFRPQ9BY79 579 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 NANSQ9NR45 359 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 C20orf141Q9NUB4 165 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 LHX6Q9UPM6 363 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 ZNF337Q9Y3M9 751 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 CORINQ9Y5Q5 1042 aa21.26■□□□□ 0.99
TSPAN4-202ENST00000397396 TNRC6AQ8NDV7 1962 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-202ENST00000397396 PCNX3Q9H6A9 2034 aa21.25■□□□□ 0.99
TSPAN4-202ENST00000397396 UNC119BA6NIH7 251 aa21.25■□□□□ 0.99
TSPAN4-202ENST00000397396 H3BML4 177 aa21.25■□□□□ 0.99
TSPAN4-202ENST00000397396 ACTL6AO96019 429 aa21.25■□□□□ 0.99
TSPAN4-202ENST00000397396 PEPDP12955 493 aa21.25■□□□□ 0.99
TSPAN4-202ENST00000397396 OSMP13725 252 aa21.25■□□□□ 0.99
TSPAN4-202ENST00000397396 POU3F2P20265 443 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms