RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 FKRPQ9H9S5 495 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZFP64Q9NPA5 681 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SERINC1Q9NRX5 453 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 GPR83Q9NYM4 423 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 CHRNA9Q9UGM1 479 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF229Q9UJW7 825 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 KCNMB2Q9Y691 235 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 PCNX3Q9H6A9 2034 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 CEP295Q9C0D2 2601 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 TMEM72A0PK05 275 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZIC3O60481 467 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 HMGN1P05114 100 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 LYNP07948 512 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 RPSAP08865 295 aaKnown RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 CCDC159P0C7I6 412 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ASAH2BP0C7U1 165 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF17P17021 662 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 BMP7P18075 431 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 GABRB1P18505 474 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 DPP4P27487 766 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ELK4P28324 431 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SRD5A2P31213 254 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 TPD52P55327 224 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 PRPS1P60891 318 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SNRPGP62308 76 aaKnown RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 RPS4XP62701 263 aaKnown RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 MYBPC1Q00872 1141 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 CD47Q08722 323 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 CDK5R2Q13319 367 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 TOP3AQ13472 1001 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 GINS1Q14691 196 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 MAD2L1BPQ15013 274 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 INPP5JQ15735 1006 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 C6orf141Q5SZD1 244 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SLC25A25Q6KCM7 469 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SMARCD3Q6STE5 483 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 LINC00696Q6ZRV3 163 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 OAFQ86UD1 273 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 OR8J1Q8NGP2 316 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 POC1BQ8TC44 478 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SLC25A43Q8WUT9 341 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF566Q969W8 418 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 PRRG3Q9BZD7 231 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 UBQLN3Q9H347 655 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ANKRD10Q9NXR5 420 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 BOKQ9UMX3 212 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 KLF13Q9Y2Y9 288 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 PCDHGB5Q9Y5G0 923 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SPIN1Q9Y657 262 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 KPNA4O00629 521 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 GNB5O14775 395 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 SOX14O95416 240 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 CH25HO95992 272 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 SP1P08047 785 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 SAGP10523 405 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 POU1F1P28069 291 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 CCL11P51671 97 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 FXYD6P3P58550 94 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 FOXF1Q12946 379 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 HYAL4Q2M3T9 481 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 DEFB109BQ30KR1 87 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 KCTD21Q4G0X4 260 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 RBM48Q5RL73 367 aaKnown RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 FAM69AQ5T7M9 428 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 C1orf140Q5VVS0 124 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 Q6ZPB1 254 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 ENTHD1Q8IYW4 607 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 OR2T33Q8NG76 320 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 MFSD8Q8NHS3 518 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 TAAR8Q969N4 342 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 DDIT4LQ96D03 193 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 KTI12Q96EK9 354 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 SCMH1Q96GD3 660 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 GNRHR2Q96P88 292 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 SIGLEC12Q96PQ1 595 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 GPX7Q96SL4 187 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 SMAD5Q99717 465 aaKnown RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 PTDSS2Q9BVG9 487 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 TSSK6Q9BXA6 273 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 POLDIP3Q9BY77 421 aaKnown RBP12.31□□□□□ -0.44
MCF2L-209ENST00000397036 PLA2G12AQ9BZM1 189 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 OR52D1Q9H346 318 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 NANSQ9NR45 359 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 DEPPQ9NTK1 212 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 MYRFQ9Y2G1 1151 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 HIF3AQ9Y2N7 669 aa12.31□□□□□ -0.44
MCF2L-209ENST00000397036 URB1O60287 2271 aaKnown RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 LRRC3CA6NJW4 275 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 LINC01387J3KSC0 135 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 IDH3BO43837 385 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 EFNA2O43921 213 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 GMFGO60234 142 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 NME2P1O60361 137 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 NDUFB2O95178 105 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 BGLAPP02818 100 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms