RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 AURKBQ96GD4 344 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-205ENST00000395794 TMEM19Q96HH6 336 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 ARL5BQ96KC2 179 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 POTEKPQ9BYX7 375 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 RABEP2Q9H5N1 569 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 VIPAS39Q9H9C1 493 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 RLIMQ9NVW2 624 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 CCDC167Q9P0B6 97 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 PRSS50Q9UI38 385 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 OSGIN1Q9UJX0 560 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 ING1Q9UK53 422 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF443Q9Y2A4 671 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-205ENST00000395794 IFT52Q9Y366 437 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 PCDHB14Q9Y5E9 798 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 DSPPQ9NZW4 1301 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 IGKV3D-15A0A087WSY6 115 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 TMEM72A0PK05 275 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 NR5A2O00482 541 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 ADAM11O75078 769 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 MRPL33O75394 65 aaKnown RBP12.18□□□□□ -0.46
CXCL12-205ENST00000395794 CD3EP07766 207 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 PPIBP23284 216 aaKnown RBP12.18□□□□□ -0.46
CXCL12-205ENST00000395794 HOXC12P31275 282 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 MRPL19P49406 292 aaKnown RBP12.18□□□□□ -0.46
CXCL12-205ENST00000395794 FADDQ13158 208 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 RGNQ15493 299 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 STK11Q15831 433 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF311Q5JNZ3 666 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 RNF220Q5VTB9 566 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 PRAMEF8Q5VWM4 474 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 PRAMEF7Q5VXH5 474 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 ABLIM2Q6H8Q1 611 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 WBP2NLQ6ICG8 309 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 BLOC1S3Q6QNY0 202 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF836Q6ZNA1 936 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 SPDL1Q96EA4 605 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 EBF4Q9BQW3 602 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 PAIP1Q9H074 479 aaKnown RBP12.18□□□□□ -0.46
CXCL12-205ENST00000395794 TMEM45AQ9NWC5 275 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 PARPBPQ9NWS1 579 aa12.18□□□□□ -0.46
CXCL12-205ENST00000395794 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 CIB4A0PJX0 185 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 CLOCKO15516 846 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 LYZL6O75951 148 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 GPIP06744 558 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 GKN3PP0CG01 181 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 GGT1P19440 569 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-205ENST00000395794 IDUAP35475 653 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 PLAURQ03405 335 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 SQLEQ14534 574 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 TAB1Q15750 504 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 MAPK11Q15759 364 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 AGKQ53H12 422 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 RPS26P11Q5JNZ5 115 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-205ENST00000395794 FBXW9Q5XUX1 488 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.17□□□□□ -0.46
CXCL12-205ENST00000395794 P2RY8Q86VZ1 359 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 KRT73Q86Y46 540 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 CCDC103Q8IW40 242 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 BBS10Q8TAM1 723 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 SPATA9Q9BWV2 254 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 TAPBPLQ9BX59 468 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 ADAM19Q9H013 955 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 BCL2L10Q9HD36 194 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 A4GALTQ9NPC4 353 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 ASB6Q9NWX5 421 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 PLA2G2EQ9NZK7 142 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 TRIM33Q9UPN9 1127 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 CORO2BQ9UQ03 480 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 RNF115Q9Y4L5 304 aa12.17□□□□□ -0.46
CXCL12-205ENST00000395794 CCT8L1PA6NM43 557 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF716A6NP11 495 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 EVPLLA8MZ36 301 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 HS3ST1O14792 307 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 ATP4BP51164 291 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 SLC16A1P53985 500 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 PPA1Q15181 289 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 Q5PR19 223 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 TIMM23BQ5SRD1 257 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 GCNT6Q5T4J0 391 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 PAQR6Q6TCH4 344 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 CASP12Q6UXS9 341 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF611Q8N823 705 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 AKAP1Q92667 903 aaKnown RBP eCLIP12.16□□□□□ -0.46
CXCL12-205ENST00000395794 MAL2Q969L2 176 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 PERPQ96FX8 193 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 MAGEB18Q96M61 343 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 SPATA5L1Q9BVQ7 753 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 UPB1Q9UBR1 384 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.16□□□□□ -0.46
CXCL12-205ENST00000395794 SLC9A8Q9Y2E8 581 aa12.16□□□□□ -0.46
CXCL12-205ENST00000395794 MAP1AP78559 2803 aaPredicted RBP12.16□□□□□ -0.46
CXCL12-205ENST00000395794 AKAP6Q13023 2319 aa12.15□□□□□ -0.46
CXCL12-205ENST00000395794 A8MVM7 634 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms