RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TRABD2BA6NFA1 517 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 FLRT2O43155 660 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 SERPINA3P01011 423 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 PEPDP12955 493 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 MAT2AP31153 395 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 TNFRSF4P43489 277 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CAPZA2P47755 286 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 RAG2P55895 527 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 RPS11P62280 158 aaKnown RBP eCLIP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 POU4F2Q12837 409 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CAMK2DQ13557 499 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 EXOSC7Q15024 291 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CDK5R1Q15078 307 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 LGALSLQ3ZCW2 172 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 HSD17B12Q53GQ0 312 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CMIPQ8IY22 773 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 IZUMO1Q8IYV9 350 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CDRT4Q8N9R6 151 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 TMEM52Q8NDY8 209 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 OR6C4Q8NGE1 309 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CNOT9Q92600 299 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 SMIM19Q96E16 107 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 C7orf50Q9BRJ6 194 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CCDC86Q9H6F5 360 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 AUNIPQ9H7T9 357 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 TMEM27Q9HBJ8 222 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 AK6Q9Y3D8 172 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 MYO15AQ9UKN7 3530 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 A0A0B4J2E0 115 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 A0A1B0GX12 115 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 GSTZ1O43708 216 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 NGFRP08138 427 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 IKZF1Q13422 519 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 COL28A1Q2UY09 1125 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 PTCHD1Q96NR3 888 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 STACQ99469 402 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF559Q9BR84 538 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 IL21RQ9HBE5 538 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 DLL4Q9NR61 685 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 UCKL1Q9NWZ5 548 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 SPATA2Q9UM82 520 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 MRPS2Q9Y399 296 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 FGF17O60258 216 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 UCHL1P09936 223 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 UGT2B7P16662 529 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 COL9A1P20849 921 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 TFF2Q03403 129 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 SMUG1Q53HV7 270 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 SDR9C7Q8NEX9 313 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 OR52E2Q8NGJ4 325 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 OR14C36Q8NHC7 312 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 LGALS14Q8TCE9 139 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 MARVELD3Q96A59 401 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 SCARF2Q96GP6 870 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 DHRS9Q9BPW9 319 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 SRMSQ9H3Y6 488 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 BEX1Q9HBH7 125 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 GLTPQ9NZD2 209 aa16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 PCDHGA9Q9Y5G4 932 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-202ENST00000394633 TRBV23OR9-2A0A075B6M9 112 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 A0A087WV62 115 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 A0A1B0GVI7 797 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 A0A1B0GWA3 101 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 A0A1W2PQF6 199 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 CTDSPLO15194 276 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 BRINP1O60477 761 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 ADAM11O75078 769 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 ARL6IP5O75915 188 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 IFNGP01579 166 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 ATP1B1P05026 303 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 CT62P0C5K7 136 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 FOSL2P15408 326 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 DRD5P21918 477 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 ENPP1P22413 925 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 SLC6A6P31641 620 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 GABRA3P34903 492 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 MAP3K8P41279 467 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 ZP1P60852 638 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 SNTB2Q13425 540 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 SMAD2Q15796 467 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 ARHGAP11AQ6P4F7 1023 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 RTL4Q6ZR62 310 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 PRSS41Q7RTY9 318 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 OR51L1Q8NGJ5 315 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 SMIM4Q8WVI0 70 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 DACT3Q96B18 629 aaPredicted RBP16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 ERMAPQ96PL5 475 aaPredicted RBP16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 OR2M4Q96R27 311 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 OR14A2Q96R54 314 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 C14orf105Q9NVL8 296 aa16.87■□□□□ 0.29
PCDHA1-202ENST00000394633 PRSS38A1L453 326 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 HPXP02790 462 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 ADRB1P08588 477 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 NTSR1P30989 418 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 HOXD11P31277 338 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 GDNFP39905 211 aa16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 GBX2P52951 348 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-202ENST00000394633 POU6F2P78424 691 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 232.6 ms