RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 GPA33Q99795 319 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 TMEM246Q9BRR3 403 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 G6PC3Q9BUM1 346 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 EDEM2Q9BV94 578 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 ULBP3Q9BZM4 244 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 UCK2Q9BZX2 261 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 POLE4Q9NR33 117 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 POLE3Q9NRF9 147 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 ACOXLQ9NUZ1 547 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 SLC39A1Q9NY26 324 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 KCNN3Q9UGI6 736 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 KLHL21Q9UJP4 597 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 SLC7A7Q9UM01 511 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 RNF6Q9Y252 685 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 PRELID1Q9Y255 219 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 POFUT2Q9Y2G5 429 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 PCDHGA6Q9Y5G7 932 aa6.37□□□□□ -1.39
RTN4-205ENST00000394609 ARRDC5A6NEK1 342 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 C4orf47A7E2U8 309 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 H3BN98 237 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 M0R129 80 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 XPNPEP2O43895 674 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ICMTO60725 284 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ADAM11O75078 769 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CPNE3O75131 537 aaKnown RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 ALOX12BO75342 701 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ADAP00813 363 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 UBL4AP11441 157 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 DRD5P21918 477 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 MMP11P24347 488 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CHMP24386 653 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 HLA-DMAP28067 261 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 IFNA8P32881 189 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ETV5P41161 510 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ATP12AP54707 1039 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 GALK2Q01415 458 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 MC2RQ01718 297 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 PIGFQ07326 219 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ST3GAL3Q11203 375 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 TNK1Q13470 666 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 TRAM2Q15035 370 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 EBPQ15125 230 aaKnown RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 PTGES3Q15185 160 aaKnown RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 OR1Q1Q15612 314 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 SMN1Q16637 294 aaKnown RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 DECR1Q16698 335 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 HLA-DQA1Q5Y7H0 255 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ZNF730Q6ZMV8 503 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CCDC81Q6ZN84 652 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CREB3L2Q70SY1 520 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 RRM2BQ7LG56 351 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 NOXA1Q86UR1 476 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 RANBP3LQ86VV4 465 aaPredicted RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 SNX29P2Q8IUI4 249 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 FAM109AQ8N4B1 249 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 OR1N1Q8NGS0 311 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 GRHL3Q8TE85 626 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 TMEM255BQ8WV15 326 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 METTL21AQ8WXB1 218 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 MR1Q95460 341 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 NACC2Q96BF6 587 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 LCORQ96JN0 433 aaPredicted RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 HRASLS5Q96KN8 279 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ADOQ96SZ5 270 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CMKLR1Q99788 373 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 SLC30A2Q9BRI3 323 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CRB3Q9BUF7 120 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 POLR2J3Q9H1A7 115 aaKnown RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 C14orf105Q9NVL8 296 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 MRPL39Q9NYK5 338 aaKnown RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 CNIH4Q9P003 139 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 COPS7AQ9UBW8 275 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 REV1Q9UBZ9 1251 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 NUP50Q9UKX7 468 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 MGAT4BQ9UQ53 548 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 B3GALT1Q9Y5Z6 326 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 FER1L5A0AVI2 2057 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 SYNDIG1LA6NDD5 238 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 VSTM2BA6NLU5 285 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 NPIPB9F8W1W9 429 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 BET1O15155 118 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ARHGEF9O43307 516 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 PAX4O43316 350 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 FAM20BO75063 409 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 REM1O75628 298 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 UTS2O95399 124 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CSTAP01040 98 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 KLK3P07288 261 aaPredicted RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 IL7P13232 177 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 OSMP13725 252 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 HPGDP15428 266 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 SPNP16150 400 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 GPR143P51810 404 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 NKX2-5P52952 324 aaPredicted RBP6.36□□□□□ -1.39
RTN4-205ENST00000394609 ASAH1Q13510 395 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 ZNF141Q15928 474 aa6.36□□□□□ -1.39
RTN4-205ENST00000394609 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.36□□□□□ -1.39
RTN4-205ENST00000394609 WDR88Q6ZMY6 472 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms