RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CNOT2Q9NZN8 540 aaKnown RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 CEP170BQ9Y4F5 1589 aaPredicted RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 DUOX1Q9NRD9 1551 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 NDUFB2O95178 105 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 RPL22L1Q6P5R6 122 aaKnown RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 RPL10LQ96L21 214 aaKnown RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 NMES1Q9C002 83 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 CACFD1Q9UGQ2 172 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 INTS6Q9UL03 887 aaKnown RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 TAAR5O14804 337 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 CXCR4P61073 352 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 CATSPEREQ5SY80 951 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 COMMD1Q8N668 190 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 CD200R1Q8TD46 325 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 HHLA2Q9UM44 414 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 OR1A2Q9Y585 309 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 YKT6O15498 198 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ACSM4P0C7M7 580 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 CTXN1P60606 82 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 HIST1H3AP68431 136 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 CDK5R2Q13319 367 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 FBXL12Q9NXK8 326 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 SPATA31C2B4DYI2 1134 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 SLC16A5O15375 505 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 PRICKLE3O43900 615 aaPredicted RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 CNR2P34972 360 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 INHBEP58166 350 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 TAS2R45P59539 299 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 KRTDAPP60985 99 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ZNF90Q03938 601 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 PPP1R3AQ16821 1122 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 OR52E8Q6IFG1 317 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 KLHDC8BQ8IXV7 354 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 MKXQ8IYA7 352 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 FAAP24Q9BTP7 215 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 OR51B5Q9H339 312 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 POFUT1Q9H488 388 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 SLC2A4RGQ9NR83 387 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 STYXL1Q9Y6J8 313 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 OR5K4A6NMS3 321 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ENSAO43768 121 aaKnown RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 F3P13726 295 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 CLINT1Q14677 625 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 TSLPQ969D9 159 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ESAMQ96AP7 390 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 FAM103A1Q9BTL3 118 aaKnown RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 A0A1W2PPH5 198 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ACP2P11117 423 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ITGAMP11215 1152 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ATP1B3P54709 279 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 TMEM201Q5SNT2 666 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 KRTCAP2Q8N6L1 136 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 MACROD1Q9BQ69 325 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 FBXO8Q9NRD0 319 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 NRXN1Q9ULB1 1477 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ALPK2Q86TB3 2170 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 KLF8O95600 359 aaPredicted RBP12.61□□□□□ -0.39
USP49-203ENST00000394253 NME2P22392 152 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 TCTE1Q5JU00 501 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 KCNA7Q96RP8 456 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 KCTD3Q9Y597 815 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 ANKRD36CQ5JPF3 1778 aa12.61□□□□□ -0.39
USP49-203ENST00000394253 SERTM2A0A1B0GWG4 89 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 FAM155AB1AL88 458 aaPredicted RBP12.6□□□□□ -0.39
USP49-203ENST00000394253 LDB2O43679 373 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 JMJD7P0C870 316 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 MTHFD2P13995 350 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 FKBP1CQ5VVH2 108 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 SERINC5Q86VE9 423 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 EVA1AQ9H8M9 152 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 IL17RBQ9NRM6 502 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 PPRC1Q5VV67 1664 aaKnown RBP12.6□□□□□ -0.39
USP49-203ENST00000394253 PMS2P2O95744 297 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 DDAH2O95865 285 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 GALTP07902 379 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 NRLP54845 237 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 GAB1Q13480 694 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 SLC9A3R2Q15599 337 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 LMNTD1Q8N9Z9 388 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 TANKQ92844 425 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 AKR1E2Q96JD6 320 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 MS4A4EQ96PG1 132 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 PRR36Q9H6K5 1346 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 MEIS3P1A6NDR6 274 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 FAM166BA8MTA8 275 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 M0QZK8 103 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 GGCTO75223 188 aaKnown RBP12.6□□□□□ -0.39
USP49-203ENST00000394253 CBX7O95931 251 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 RPE65Q16518 533 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 HAS1Q92839 578 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 PARD6AQ9NPB6 346 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 ZNF355PQ9NSJ1 428 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 CST2P09228 141 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 REC114Q7Z4M0 266 aa12.6□□□□□ -0.39
USP49-203ENST00000394253 ASPGQ86U10 573 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms