RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 F13BP05160 661 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 ZNF28P17035 718 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 GALNSP34059 522 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 SDC2P34741 201 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 RPL4P36578 427 aaKnown RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 NAA10P41227 235 aaPredicted RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 PLCXD2Q0VAA5 305 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 NKAIN1Q4KMZ8 207 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 BICRALQ6AI39 1079 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 ATG4DQ86TL0 474 aaPredicted RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 FAM98AQ8NCA5 519 aaKnown RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 OR1N1Q8NGS0 311 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 DTNBP1Q96EV8 351 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 TEX12Q9BXU0 123 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 NXF2Q9GZY0 626 aaKnown RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 MKKSQ9NPJ1 570 aaPredicted RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 PRMT8Q9NR22 394 aaPredicted RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 MED17Q9NVC6 651 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 CHRNA9Q9UGM1 479 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 EXOSC1Q9Y3B2 195 aaKnown RBP13.06□□□□□ -0.32
RNF41-202ENST00000394013 ASPMQ8IZT6 3477 aa13.06□□□□□ -0.32
RNF41-202ENST00000394013 ELOA3DA6NLF2 546 aaPredicted RBP13.05□□□□□ -0.32
RNF41-202ENST00000394013 H7C1C5 153 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 SLC2A5P22732 501 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ITPKBP27987 946 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 TACR3P29371 465 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 IL12BP29460 328 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 CD40LGP29965 261 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 GRPRP30550 384 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 GPR143P51810 404 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 LCN6P62502 163 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 C11orf91Q3C1V1 193 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ELOA3BQ3SY89 546 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 RHBDD2Q6NTF9 364 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ZNF322Q6U7Q0 402 aaPredicted RBP13.05□□□□□ -0.32
RNF41-202ENST00000394013 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ELOA3Q8NG57 546 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ZNF563Q8TA94 476 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 IFI44Q8TCB0 444 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 DACH2Q96NX9 599 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
RNF41-202ENST00000394013 ALG8Q9BVK2 526 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 MMP27Q9H306 513 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ADGRL4Q9HBW9 690 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 FAM86C2PA6NEL3 165 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 SNTNA6NMZ2 147 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 MASP2O00187 686 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 CDC40O60508 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
RNF41-202ENST00000394013 TSPAN2O60636 221 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 NUDT14O95848 222 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 E2F1Q01094 437 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 HLA-DQA1Q5Y7H0 255 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 PLEKHG7Q6ZR37 379 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 RTL4Q6ZR62 310 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 PARP16Q8N5Y8 322 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 SSR3Q9UNL2 185 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 SLC35A3Q9Y2D2 325 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 SDK2Q58EX2 2172 aa13.05□□□□□ -0.32
RNF41-202ENST00000394013 OR6C68A6NDL8 312 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 RIIAD1A6NNX1 92 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 ZNF670-ZNF695F2Z2N8 137 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 PSMD9O00233 223 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 TFP02787 698 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 PEPDP12955 493 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 PAICSP22234 425 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 RBM34P42696 430 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 PSMD4P55036 377 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 CLDN6P56747 220 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 FBXW4P57775 412 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 HNRNPA0Q13151 305 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 TRIM61Q5EBN2 209 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 C1orf210Q8IVY1 113 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 TMEM105Q8N8V8 129 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 CEP76Q8TAP6 659 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 UFD1Q92890 307 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 DAZLQ92904 295 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 Q96M85 177 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 KATNB1Q9BVA0 655 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 WDR12Q9GZL7 423 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 PPIL3Q9H2H8 161 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 ASB6Q9NWX5 421 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 CCDC59Q9P031 241 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 DAPK2Q9UIK4 370 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 ICAM5Q9UMF0 924 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 A0A087WV48 116 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 RGS5O15539 181 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 DYRK3O43781 588 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 GUSBP08236 651 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 TCEA1P23193 301 aaKnown RBP13.04□□□□□ -0.32
RNF41-202ENST00000394013 SLC6A6P31641 620 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 OR12D2P58182 307 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 ZNF85Q03923 595 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 TPBGQ13641 420 aa13.04□□□□□ -0.32
RNF41-202ENST00000394013 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms